Geodermatophilus obscurus: Gobs_0184
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Entry
Gobs_0184 CDS
T01163
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gobs_0184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gob03019
]
Gobs_0184
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_0184
Enzymes [BR:
gob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gobs_0184
Messenger RNA biogenesis [BR:
gob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Gobs_0184
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Gobs_0184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ADB72990
UniProt:
D2S3W2
LinkDB
All DBs
Position
192384..194609
Genome browser
AA seq
741 aa
AA seq
DB search
MSTAAPTTDLALEALGVLRELTGRPDAEFREGQDAAVAALVERAERALVVQRTGWGKSAV
YFVSTALLRRRGAGPTLLVSPLLALMRDQVAAAARAGIRAVEISSANATEWDDVAAALAA
DDVDVLLVSPERLTNPRFREEQLPDLVARCGLLVVDEAHCVSDWGHDFRPDYRRIRDLLG
TLPAGTPVLATTATANERVVADVAEQLGAGGVGVTTVRGPLARDSLRLGVLRLPTDRARL
AWLAAHLGDLPGSGIVYTLTVAAAEETAALLRDAGHEVRAYTGRLDDADRKDAEEALREN
RVKALVATSALGMGFDKPDLGFVVHLGAPSSPVSYYQQVGRAGRAVEHADVLLLPGPEDL
AIWQWFATSSMPREDHAAAVLSAMADGKAWSVARLETVADVRRSRLELLLKVLAVDGAVE
RVQGGWRSTGRPWVYDADRYARVTRTREAEQRAMIAYAKPVDEARCRMAFLQEALDDPTA
APCGRCDVCAGPWYSSDVPEGAAQAASAALDRPGVELAPRAQWPTGADRLGVEVKGRIAP
GEQLDPGRAVARLTDLGWGQRLRTLLGDDGVGGTVTLDLEAPGIEEDPDAAFDVPVQRSV
SDVPPDEELLRACARVLGAWDWAERPAAVVAVPSRRRPQLVTGLAQGLAGLGRLPYLGEL
SLAHGGPTGQPGGNSAFRLAGVWQRMVVGPELRERLAQLGPVPVLLVDDLADSRWTMTVA
GRELRLAGASRVLPFALALTA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgccgcgcccacgaccgacctcgccctcgaggccctcggggtcctccgcgag
ctgaccggccggcccgacgccgagttccgcgaggggcaggacgccgccgtcgccgcgctg
gtcgagcgcgccgagcgggcgctggtcgtgcagcgcaccgggtggggcaagtcggcggtc
tacttcgtctccaccgcgctgctccgccgccgcggcgccgggccgaccctgctggtgagc
ccgctgctcgcgctcatgcgcgaccaggtcgccgccgccgcgcgcgccggcatccgcgcc
gtcgagatctccagcgccaacgccaccgagtgggacgacgtcgccgccgcgctggccgcc
gacgacgtcgacgtcctgctggtctccccggagcggctgaccaacccgcgcttccgcgag
gagcagctgccggacctggtcgcccgctgcggcctgctcgtcgtcgacgaggcgcactgc
gtctccgactgggggcacgacttccgccccgactaccgccgcatccgtgacctgctgggc
acgctcccggccgggacgccggtgctcgcgaccaccgccaccgcgaacgagcgggtcgtc
gccgacgtcgccgagcagctcggcgccggtggcgtgggcgtgacgaccgtgcggggcccg
ctggcccgcgactcgctgcgcctcggcgtcctccgcctgcccaccgaccgggcccggctg
gcctggttggccgcccacctgggggacctgccgggcagcggcatcgtctacacgctcacc
gtcgcggcggccgaggagaccgccgcgctgctgcgcgacgcgggccacgaggtgcgcgcc
tacaccggtcggctcgacgacgccgaccgcaaggacgccgaggaggcgctgcgggagaac
cgggtcaaggcgctggtggccacctccgcgctcggcatgggcttcgacaagcccgacctc
gggttcgtcgtccacctcggggcgccctcgtcgccggtcagctactaccagcaggtcggc
cgcgccggccgcgccgtcgagcacgccgacgtgctgctgctgcccggccccgaggacctc
gcgatctggcagtggttcgccacctcctccatgccgcgggaggaccacgccgccgcggtg
ctgtcggcgatggccgacggcaaggcctggtcggtggcccggctggagacggtggccgac
gtccgccgctcccggctggagctgctgctcaaggtgctcgccgtcgacggcgcggtggaa
cgggtgcagggcgggtggcggtccaccggccgcccgtgggtctacgacgccgaccgctac
gcccgggtgacgcgcacccgcgaggccgagcagcgggcgatgatcgcctacgcgaagccg
gtcgacgaggcgcggtgccggatggccttcctgcaggaagctctcgacgacccgaccgcc
gcgccgtgcggccgctgcgacgtctgcgcgggcccctggtactcctcggacgtcccggag
ggtgcggcccaggccgcctcggcagcgctcgaccgccccggcgtggagctcgccccgcgc
gcccagtggccgaccggcgccgaccgcctcggcgtcgaggtcaagggcaggatcgcaccg
ggcgagcagctcgacccgggccgcgccgtcgcccggctgaccgacctcggctggggtcag
cggctgcgcaccctgctcggggacgacggcgtcggcggcacggtcaccctcgacctggag
gcgcccggcatcgaggaggacccggacgccgccttcgacgtcccggtgcagcggtccgtg
tccgacgtcccgccggacgaggagctgctgcgtgcgtgtgcgcgggtgctcggggcctgg
gactgggccgaacggccggccgccgtggtcgccgtcccctcccgccgtcggccgcagctg
gtgaccgggctcgcccaggggctggccgggctcggccggttgccctacctcggggagctg
tcccttgcgcacggcggtccgaccggccagcccggcggcaacagcgccttccggctggcc
ggggtgtggcaacggatggtcgtcggccccgagctgcgcgagcgcctggcccagctgggt
ccggtgccggtgctgctggtcgacgacctcgccgactcacgctggaccatgaccgtcgcc
ggtcgtgagctgcgcctggccggcgcctcccgtgtcctgcctttcgcactggccctcacc
gcctga
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