Geodermatophilus obscurus: Gobs_0647
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Entry
Gobs_0647 CDS
T01163
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
gob
Geodermatophilus obscurus
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_0647
Enzymes [BR:
gob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
Gobs_0647
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
Gobs_0647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
ADB73425
UniProt:
D2S7C5
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All DBs
Position
690691..692277
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AA seq
528 aa
AA seq
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MPQDPAVDRVVPGTPRRLGGDPALAAFPARAPGTRRWCFADQLGPHFLDRPDQPVLLIES
RAVFARRRFHRQKAHLVLSALRHRAAELGDQAQFSQVHSYAEALDRVREPLSVCAPTTWS
SRDYVLRRPDLTVLAARGFVATQEEFAAWAEGRGRRRLLMEDFYRDNRRRHDVLMDGAEP
VGGRWNLDHDNREPPPSDGRLDIPGPWWPEEDEIDEQVRADLDRWEADGDVAFVGDDGPR
LFPVTREEALHRLRDFLDTRLGAFGPHEDAMLAGDRWMTHSLLSPAVNLGLLDPIEEVHA
AEQRYRDSVAEGDPLPLNSVEGFVRQVMGWRDYIWHTYWHFGRDFRHANALAAHEAVPDW
LADLDDGAVDAACMSDVLGDLRRDGWVHHIPRLMVLGNYALQRGIDPLAMTDWFHRSFVD
GYDWVMIANVVGMSQHADGGLLATKPYAAGGAYIDRMSDYCGGCRYDPRKRLGEDACPFT
AGYWAFLERNRERLAPNQRMRRALQGLDRLKGLEEVVEQERLRGTEAI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcaggacccggcggttgaccgcgtggtgcccggcacgccgcgacggctcgggggc
gacccggcgctggccgcgttccccgcccgcgcgccgggcacccggcggtggtgcttcgcc
gaccagctcgggccgcacttcctcgaccggccggaccagccggtcctgctgatcgagtcc
agggcggtgttcgcgcgccgccggttccaccgccagaaggcccacctggtgctgtcggcg
ctgcgccaccgggccgccgagctgggcgaccaggcgcagttctcccaggtgcactcctac
gccgaggcgctggaccgggtgcgcgagccgctgagcgtgtgcgcccccaccacctggagc
agccgcgactacgtgctgcgccgtcccgacctcaccgtcctcgccgcccgcgggttcgtc
gccacgcaggaggagttcgccgcctgggcggagggtcgcggccggcggcggctgctcatg
gaggacttctaccgggacaaccggcgccgccacgacgtcctcatggacggagccgagccg
gtgggcgggcgctggaacctcgaccacgacaaccgggagcccccgccgtccgacgggcgt
ctcgacatccccgggccgtggtggccggaggaggacgagatcgacgagcaggtgcgcgcc
gacctcgaccgctgggaggccgacggcgacgtggccttcgtgggggacgacggcccgcgg
ctgttcccggtgacccgcgaggaggcgctgcaccggctgcgcgacttcctcgacacccgg
ctcggcgcgttcggcccgcacgaggacgccatgctcgccggcgaccgctggatgacgcac
tcgctgctctccccggccgtcaacctcggcctgctggacccgatcgaggaggtgcacgcc
gccgagcagcgctaccgcgactccgtggccgagggcgacccgctgccgctcaacagcgtg
gaggggttcgtccgccaggtcatgggctggcgcgactacatctggcacacctactggcac
ttcggccgggacttccggcacgccaacgccctggccgcgcacgaggcggtgccggactgg
ctggccgacctcgacgacggggccgtcgacgccgcgtgcatgtccgacgtcctcggcgac
ctgcgccgcgacggctgggtgcaccacatcccgcggctgatggtgctcggcaactacgcg
ctgcagcgcggcatcgacccgctggcgatgaccgactggttccaccgcagcttcgtcgac
ggctacgactgggtgatgatcgccaacgtcgtcggcatgagccagcacgccgacggcggg
ctgctggccaccaagccctacgccgccggcggcgcctacatcgaccggatgagcgactac
tgcggcggctgccgctacgacccgcggaagcggctgggcgaggacgcctgccccttcacc
gccggctactgggccttcctcgagcgcaaccgcgagcggctggcacccaaccagcggatg
cgccgtgcgctgcagggtctcgaccggctcaagggcctggaggaggtcgtcgagcaggag
cgtctgcgcggcaccgaggccatctga
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