Geodermatophilus obscurus: Gobs_0803
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Entry
Gobs_0803 CDS
T01163
Name
(GenBank) type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Gobs_0803
09124 Replication and repair
03420 Nucleotide excision repair
Gobs_0803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gob03021
]
Gobs_0803
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_0803
Enzymes [BR:
gob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gobs_0803
Transcription machinery [BR:
gob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Gobs_0803
DNA repair and recombination proteins [BR:
gob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Gobs_0803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADB73567
UniProt:
D2S8E5
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All DBs
Position
complement(855796..857481)
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AA seq
561 aa
AA seq
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MSDGPLIVQSDKTLLLEVDHPAARDCRAAIAPFAELERSPEHVHTYRVTPLALWNARAAG
HDAEQVVDALVRHSRYPVPHALLVDIADTMDRFGRLTLANNPVHGLVLTTSDRAVLEEVV
RSKRVAPMLGARIDEDTVVVHPSERGRLKQALLKIGWPAEDLAGYVDGQAHPIELAQDGW
HLRDYQQEAVEGFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAGRQWKRE
LIARTSLTEEEIGEYSGERKEIRPVTIATYQVITTRRKGEYRHLDLFDAQDWGLIVYDEV
HLLPAPIFRLTADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWRDIEAQGYIAP
AECIEVRVSLDDEERMTYAVAEPEERYRIAATATSKLPVIRRVLDRHPDEQKLVIGAYLD
QLDELGRALDAPVIQGSTTNREREKLFDAFRAGEVKTLVVSKVANFSIDLPEAAVAVQVS
GTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTLDAEYAAHRQRFLAEQGYAYTIVD
AADLAGPGEVNGPDWVDEPAD
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacggccccctgatcgtccagtcggacaagaccctgctgctcgaggtcgaccac
cccgccgcccgcgactgccgcgcggcgatcgcgccgttcgcggagctggagcgctccccg
gagcacgtgcacacctaccgggtgacgccgctggcgctgtggaacgcgcgggccgccggg
cacgacgccgagcaggtcgtcgacgcactggtccgccactcccgctacccggtgccgcac
gcgctgctggtcgacatcgccgacacgatggaccggttcggccggctcacgctggccaac
aacccggtgcacgggctggtgctcaccacctccgaccgcgcggtgctcgaggaggtcgtc
cgcagcaagcgggtggcgccgatgctgggcgcgcggatcgacgaggacaccgtggtcgtc
cacccgtcggagcgcgggcggctcaagcaggccctgctcaagatcggctggcccgccgag
gacctggccggctacgtcgacggccaggcgcacccgatcgagctggcccaggacggctgg
cacctgcgcgactaccagcaggaggcggtcgaggggttctgggccggcggctcgggcgtc
gtcgtcctcccctgtggcgcgggcaagacgctggtcggcgccgcggcgatggccgaggcg
aaggcgaccacgctgatcctggtgaccaacaccgtcgccgggcggcagtggaagcgcgag
ctgattgcccgcacctcgctgaccgaggaggagatcggcgagtactccggcgagcgcaag
gagatccgcccggtcaccatcgccacctatcaggtgatcaccacccgtcggaagggcgag
taccggcacctggacctgttcgacgcccaggactggggcctgatcgtctacgacgaggtg
cacctgctgcccgcaccgatcttccggctcaccgccgacctgcagtcccgccgtcggctg
ggcctgaccgccacgctggtgcgcgaggacggccgcgaggacgacgtcttctctctcatc
ggcccgaagcgctacgacgcaccgtggcgtgacatcgaggcgcagggctacatcgcgccg
gccgagtgcatcgaggtgcgggtgtccctcgacgacgaggagcggatgacctacgcggtc
gccgagcccgaggagcggtaccggatcgccgcgaccgcgacgtcgaagctgccggtcatc
cggcgggtgctcgaccggcaccccgacgagcagaagctggtcatcggcgcctacctcgac
cagctcgacgagctcggccgggcgctcgacgccccggtcatccaggggtcgacgaccaac
cgggagcgggagaagctcttcgacgccttccgcgccggggaggtcaagaccctggtggtg
tccaaggtcgccaacttctccatcgacctgcccgaggccgccgtcgccgtccaggtgtcg
gggaccttcggctcgcgccaggaggaggcccagcgactgggccgggtgctgcgccccaag
gccgacggccggcaggcgcacttctacacggtggtcagccgcgacaccctcgacgccgag
tacgccgcccaccggcagcgcttcctggccgagcagggctacgcgtacaccatcgtcgac
gccgccgacctggccggccccggtgaggtcaacggccccgactgggtggacgagcccgcc
gactga
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