Geodermatophilus obscurus: Gobs_0821
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Entry
Gobs_0821 CDS
T01163
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gob
Geodermatophilus obscurus
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gob03016
]
Gobs_0821
Enzymes [BR:
gob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Gobs_0821
Transfer RNA biogenesis [BR:
gob03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Gobs_0821
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ADB73585
UniProt:
D2S8G3
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All DBs
Position
872590..873156
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AA seq
188 aa
AA seq
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MTAPRPRRLFFAVTPPAEALADLDQALAPLREMPGAPRWTPPDRWHLTLLFLGAVPPDRV
AELVAAAAPAVAATPSMTLQLAGAGRFGSRRRPQVFWAGVTGDGDGLGALAGRLAAVARG
LRMPVEERPFRAHLTLGRWRPGRPGDGDLPDRLAGYRGRDWPVTEVELLESHLGPAPRYD
RVAAWPLG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcaccacggccgcggcggctgttcttcgcggtcaccccgccggccgaggccctg
gccgacctggaccaggccctggcgccgctgcgcgagatgccgggcgcaccgcgctggacg
ccgccggaccgctggcacctgacgctgctcttcctcggcgcggtcccgcccgatcgggtg
gctgagctggtggccgcagcggcgcccgcggtggcggccaccccgtcgatgaccctccag
ctcgccggcgccggacggttcggctcgcgccgccgtccgcaggtgttctgggccggggtc
acgggtgacggcgatgggctgggcgccctcgccggccggctggccgccgtcgcccggggg
ctccggatgccggtggaggagcggccgttccgtgcccacctcaccctgggccgctggcgg
ccgggccggccgggggacggcgacctgcccgaccggctggccggctaccgggggcgcgac
tggccggtgaccgaggtggagctgctggagagccacctcggtcctgcgccgcggtacgac
cgggtcgcggcctggccgctcggctga
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