Geodermatophilus obscurus: Gobs_0925
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Entry
Gobs_0925 CDS
T01163
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Gobs_0925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_0925
Enzymes [BR:
gob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Gobs_0925
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Gobs_0925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADB73687
UniProt:
D2S944
LinkDB
All DBs
Position
985731..986516
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AA seq
261 aa
AA seq
DB search
MATDAAGFPVTRSPAGVVRSARSTRDLAVLDARISGCRACPRLVAWREEVACVKRASFRH
EEYWGRPVPGLGPADARIAVVGLAPAAHGGNRTGRVFTGDRSGDWIFAALWRAGLANQPT
STHIGDGLQLTDVRVAAAVRCAPPANAPTPEERDTCSPWLARELALLPRLRVAVVLGGFG
WTALWPVLAGAGYPLPRPRPAFGHGVEVSLEGPRGPLTLLGSYHVSQQNTFTGKLTEPML
DAVLARATELAATLPGPPPRP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgacgcagccggcttcccggtcacccgcagcccggccggggtcgtccgctcg
gcgcggagcacccgcgacctcgccgtcctggacgcccggatctccggctgccgtgcctgc
ccgcgcctggtggcctggcgggaggaggtcgcctgcgtcaagcgggcctccttccggcac
gaggagtactggggtcgcccggtgccggggctcggcccggccgacgcccggatcgccgtc
gtcggcctggcgccggccgcgcacggcggcaaccgcaccgggcgggtgttcaccggcgac
cgcagcggggactggatcttcgccgcgctgtggcgggccggcctggccaaccagccgacg
tccacgcacatcggtgacgggctgcagctcaccgacgtgcgggtcgccgccgccgtccgc
tgcgcgccgccggcgaacgcccccacgccggaggagcgggacacctgctcaccgtggctg
gcgcgcgagctggcgctgctgccgcggctgcgggtcgccgtcgtcctcggcgggttcggc
tggacggcgctgtggccggtgctggccggggccggctacccgctgccccggccgcggccg
gcgttcgggcacggcgtcgaggtgtcgctggaggggccccgcgggccgctgaccctgctg
ggcagctaccacgtcagccagcagaacaccttcaccggcaagctcaccgagccgatgctg
gacgccgtcctcgcccgggccaccgaactggccgcgaccctgccgggaccccctccccgg
ccctag
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