Geodermatophilus obscurus: Gobs_1887
Help
Entry
Gobs_1887 CDS
T01163
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gob
Geodermatophilus obscurus
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gob03016
]
Gobs_1887
Enzymes [BR:
gob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Gobs_1887
Transfer RNA biogenesis [BR:
gob03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Gobs_1887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADB74590
UniProt:
D2SEB8
LinkDB
All DBs
Position
complement(1960507..1961763)
Genome browser
AA seq
418 aa
AA seq
DB search
MSTQPIPAQPAPAPDDEPTAPPAVPLLAPRDGLPPVIETSTALVEYAEALAAGSGPVAVD
AERASGYRYGQRAYLVQLRRVGTGTGLIDPIPLPDLSVVQSAIVDAEWVLHAASQDLPSL
AEVGLVPARLFDTELAARLAGLPRVGLGAVVESLLGYRLEKGHSAADWSTRPLPEEWLVY
AALDVEVLVDLRDALAAVLEEQGKTEWARQEFAAILAAGPPAPRADPWRRTSGVHGLRSR
RQLGMLRSLWQARDELARRRDIAPGRVLPDAAMVSAVQADPRTEAALLELPVFRGRANRK
LVGTWFGALTRGRELPESELPLHSRPGDGPPPVNRWADRDPAAATRLQAARAGLAELAAT
HSLPVENLLSPDLVRRLMWTPPEPRDAETVAATLRAGGAREWQVELTRDLLTDALDRA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ctgagcacccagcccatccctgcccagcccgcccctgcgccggacgacgagccgaccgct
cccccggcggtccccctgctcgccccgcgcgacgggctgcccccggtcatcgagacctcc
accgccctggtcgagtacgccgaggcgctggcggccggcagcggcccggtcgccgtcgac
gccgaacgcgcctccggttaccgctacggccagcgggcctatctcgtgcagctgcgccgc
gtcggcaccggcaccgggctcatcgacccgatcccgctgccggacctgtcggtcgtgcag
tcggcgatcgtcgacgccgagtgggtgctgcacgcggcgagccaggacctgccgtcgctg
gccgaggtggggctggtgccggcgaggttgttcgacaccgagctcgccgcccggctggcg
gggctgccgagggtgggactgggcgccgtcgtcgagtcgctgctgggctaccgcctggag
aaggggcactcggccgccgactggagcacccggccgctgcccgaggagtggctggtctat
gccgcgctggacgtcgaggtgctcgtcgacctgcgcgacgcgctggccgccgtcctcgag
gagcagggcaagaccgagtgggcgcggcaggagttcgccgcgatcctcgccgccggaccg
ccggcgcccagggccgacccctggcggcggacgtcgggggtgcacgggctgcgcagccgc
cggcagctcggcatgctgcgctcgctgtggcaggcccgcgacgagctggcccggcgccgt
gacatcgcccccgggcgggtgctgcccgacgcggcgatggtctccgcggtgcaggccgac
ccgcgcaccgaggccgcgctgctggagctgccggtcttccggggccgggccaaccgcaag
ctggtcggcacctggttcggggcgctgacccgcggccgggagctgccggagtccgagctg
cccctgcacagccggcccggtgacggcccgccgccggtgaaccgctgggccgaccgcgac
ccggccgccgccacccggctgcaggccgcccgcgccgggctggccgagctggccgcgacg
cactccctgccggtcgagaacctgctctcccccgacctcgtccgccggctgatgtggacc
ccgcccgagccccgggacgccgagaccgtggccgccacgctgcgggccggcggcgcccgc
gagtggcaggtcgagctcacccgcgacctgctcaccgacgcgctcgaccgcgcctga
DBGET
integrated database retrieval system
