Geodermatophilus obscurus: Gobs_2319
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Entry
Gobs_2319 CDS
T01163
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Gobs_2319
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gob01007
]
Gobs_2319
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gob03016
]
Gobs_2319
Enzymes [BR:
gob01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Gobs_2319
Amino acid related enzymes [BR:
gob01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Gobs_2319
Transfer RNA biogenesis [BR:
gob03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Gobs_2319
Prokaryotic type
Other AARSs
Gobs_2319
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
LPG_synthase_C
tRNA_anti-codon
tRNA-synt_2d
DUF6057
Motif
Other DBs
NCBI-ProteinID:
ADB74998
UniProt:
D2SH05
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All DBs
Position
complement(2405211..2408609)
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AA seq
1132 aa
AA seq
DB search
MVSETDVAGRSAGQRAHRLAKLEALRARGPAAYPYRWPPDATAAGIRAAHPGLAPDVRTT
DRVRVAGRVELIRRQGWLTFATLRDRTGAVQLYVDSSVLGPERHAEFDDVDRGDWIGAEG
TVMTTRRGELSVCVEDFAVLGKALHAPPPEHAGLSDVETRYRQRYVDLEVNERTRQVFRI
RHAAVRAIRRHLEDRDFTEVEGPVLQTIQGGASARPFVTHSNALDLDLYLRIALELHLKR
LIVGGLERVFEIGRVFRNEGVDTRHNPEFTLLEAYQAFGDITDMMELTEGLVTAAARAAL
GADLTVHYAGHSIDLAATPWPRKRFADMIAEATGATMHPAMPIDDARAVLDRLGIPYEAS
WGAGRLMKEVYDEKVQHSVVGPVFCVDYPREVSPLARVHRDDPAYVERFELIVAGFELCN
AYSEQNDPVEQLAAFEAEARAKSHGDPEAGDVDTDYVRALECGMPCTGGLGIGIDRLVML
LAGVDSIREVILFPTLRPEVPGTGPDGAVRPLVAPTPVPAGNTAGPDGAGTADGSVVALP
SMAPSAGPVPAPPPTARTHPLAVHVLAGLTALSGVLQLLTALPVVHERLVGRGTAFGPLW
VPVSGAVASVVVGLLLLLLSDQLARRKGLAWRLAVLLFAVGAGAHLVKGPHPVAVALCLA
LLAGLVRYRTAFRAPADPPSLLLVLRFVPLYLAGVLLFGLAALWAERSRIDPPLSLAGAL
QTVLAGLVGLDGPYSYDSRFFAVFYPAALLALGVAGLVVLTVLLFRPLAAARRPHTEDDW
AHASRLVHGYGWDTLAYFSLRDDKTFFFSRDGEAFLAYTYLGGYALVSGDPIGSRESVPR
VLDEFLAMCDERAWTPALLAAREASMPLYSSRGFRAFYLGDEAVIDCRRFTLEGPAKKGL
RAAVRRVGRSHRFRLVAETDAPPALVDQLNAISARWRGKNPERGFTMSLSQDVRGAGADP
GFLLCVAEDAEGRAGGFLRLVPAYGPSFGYTLDLMRHDPDAPNGMTEFLIASTATALGAR
GVARLSMNFAMWGRLFADDVPFTPAQRAARWAVGVLNPFFQIESLHDFNAKFDPEWLPRV
LAYRHRADLPRVGLRYAGAEGFLALPGLGELLVPKAVGGVPSPSAPEGRSAA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgagaccgacgtcgccgggcggagcgccggacagcgcgcgcaccggctggcc
aagctggaggccctgcgcgcccggggccccgccgcctacccctaccgctggccgccggac
gccaccgccgccggcatccgcgcggcccaccccgggctcgcccccgacgtgcggacgacg
gaccgcgtgcgggtcgccgggcgggtggagctgatccgccggcagggctggctgaccttc
gcgacgctgcgcgaccgcaccggcgcggtccagctctacgtcgacagctccgtcctcggc
cccgagcggcacgccgagttcgacgacgtcgaccgcggcgactggatcggcgccgagggc
accgtgatgaccacccggcgcggcgagctgtcggtgtgcgtcgaggacttcgccgtcctg
ggcaaggcgctgcacgcgccgccgcccgagcacgccggcctgagcgacgtcgagacccgc
taccggcagcggtacgtggacctggaggtgaacgagcgcacccggcaggtcttccgcatc
cggcacgccgcggtgcgggcgatccgccggcacctggaggaccgggacttcaccgaggtc
gaggggccggtgctgcagaccatccagggcggggcgagcgcgcggccgttcgtcacccac
tccaacgccctcgacctggacctctacctgcggatcgccctcgagctgcacctcaagcgg
ctcatcgtcggcggcctggagcgggtcttcgagatcggccgggtgttccgcaacgagggc
gtggacacccggcacaaccccgagttcacgctgctggaggcctaccaggcattcggcgac
atcaccgacatgatggagctgaccgaagggctcgtcaccgccgcagcgcgggcggccctc
ggcgcggacctcacggtgcactacgcgggtcacagcatcgacctggccgcgacgccgtgg
ccgcgtaagcggttcgccgacatgatcgccgaggccaccggcgccaccatgcaccccgcc
atgccgatcgacgacgcccgcgcggtgctcgaccggctgggcatcccctacgaggcctcc
tggggcgccgggcggctgatgaaggaggtctacgacgagaaggtgcagcactcggtcgtc
gggccggtgttctgcgtggactacccgcgcgaggtctcgccgctggcgcgggtgcaccgc
gacgacccggcctacgtcgagcgcttcgagctgatcgtcgccggcttcgagctgtgcaac
gcctactccgagcagaacgacccggtcgagcagctcgccgccttcgaggccgaggcccgc
gccaagtcgcacggcgacccggaggccggcgacgtggacaccgactacgtgcgcgcgctg
gagtgcggcatgccctgcaccggcgggctgggcatcggcatcgaccggctggtgatgctg
ctggccggcgtcgactccatccgcgaggtcatcctcttcccgacgctgcggcccgaggtc
ccgggcaccggcccggacggcgcggtgcgcccgctggtggcgcccaccccggtccccgcc
gggaacacggccggacccgacggcgcggggacggcggacggctccgtggtcgcgctgccg
tcgatggcgccctcggccggccccgtcccggcacccccgccgacggcacgcacccacccg
ctggccgtgcacgtgctcgccgggctgaccgcgctctccggcgtcctgcagctgctcacc
gccctgcccgtggtgcacgagcggctggtcggccggggcaccgcgttcggtccgctgtgg
gtgccggtgagcggcgcggtcgcgtcggtggtggtcgggctgctgctcctgctgctgtcc
gaccagctggcccggcgcaaggggctggcctggcggctggcggtgctgctgttcgccgtc
ggggcgggagcccacctggtcaaggggccgcacccggtcgccgtggcgctgtgcctggcg
ctgctcgccgggctggtgcggtaccggacggcgttccgcgcaccggccgacccgccgtcc
ctgctgctcgtgctccggttcgtcccgctgtacctggccggcgtgctgctgttcggcctg
gccgcgctgtgggccgagcggtcgcggatcgaccccccgctcagcctcgccggggcgctg
cagaccgtgctcgccgggctggtcgggctcgacggcccctacagctacgactcccggttc
ttcgcggtgttctaccccgcggcgctgctcgcgctgggggtggccgggctggtcgtgctc
acggtgctgctgttccggccgctggccgccgcccgccgtccgcacaccgaggacgactgg
gcgcacgcgtcgcggctggtgcacggctacggctgggacaccctcgcgtacttctccctg
cgcgacgacaagacgttcttcttctcccgggacggcgaggccttcctcgcctacacctac
ctcggtggctacgcgctggtctccggtgacccgatcgggtcccgcgagtccgttccgcgc
gtgctcgacgagttcctcgcgatgtgcgacgagcgggcctggacgccggccctgctggcc
gcgcgcgaggcgagcatgccgctgtactcctcgcgcgggttccgcgcgttctacctcggc
gacgaggccgtcatcgactgccgccggttcaccctcgagggtccggcgaagaaggggctg
cgcgccgccgtccggcgggtggggcgcagccaccgcttccggctcgtcgccgagaccgac
gccccgccggcgctggtcgaccagctcaacgcgatcagcgcccgctggcgcggcaagaac
cccgagcgcggcttcacgatgtcgctgtcccaggacgtgcgcggcgccggcgccgacccc
ggcttcctgctctgcgtcgcggaggacgccgagggccgggccggcggcttcctgcggctg
gtgcccgcctacgggccgtcgttcggttacacgctggacctgatgcggcacgacccggac
gcgccgaacggcatgaccgagttcctcatcgcctccaccgcgaccgcgctgggcgcccgc
ggcgtggcccggctgtcgatgaacttcgcgatgtgggggcggctgttcgccgacgacgtg
ccgttcacgcccgcccagcgcgcggcccggtgggcggtcggcgtgctgaacccgttcttc
cagatcgagtcgctgcacgacttcaacgccaagttcgaccccgagtggctgccccgcgtc
ctggcctaccggcaccgcgcggacctgccgcgggtggggctgcgctacgccggcgcggag
ggcttcctggcgctgcccggcctcggggagctgctggtccccaaggccgtcggcggtgtg
ccctcgccgtcggcgccggaggggcggtcggcggcgtga
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