Geodermatophilus obscurus: Gobs_3245
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Entry
Gobs_3245 CDS
T01163
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03030
DNA replication
gob03430
Mismatch repair
gob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gobs_3245
03430 Mismatch repair
Gobs_3245
03440 Homologous recombination
Gobs_3245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gob03032
]
Gobs_3245
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_3245
Enzymes [BR:
gob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gobs_3245
DNA replication proteins [BR:
gob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gobs_3245
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gobs_3245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Rho_N
Motif
Other DBs
NCBI-ProteinID:
ADB75850
UniProt:
D2SA35
LinkDB
All DBs
Position
complement(3406461..3410018)
Genome browser
AA seq
1185 aa
AA seq
DB search
MSTPSSDSFVHLHVHTEYSMLDGAAKLPEVTKAAAEQGMPALAMTDHGNVFGAYDFYKQA
KAAGVKPIIGMEGYYTPGSRFDRAPFDFGENLIDEDGEGGSSRGKAAYTHMTLLARTTEG
MHNLFRISSMASLEGQYRKPRFDRDLLERYGTGLIATTGCPSGEVNMWLRAGKHDRARQA
AADFQDIFGKENFYAEVMDHGLAIEKKTRPALLEIAKELGIPLLGTNDLHYTHREDAEAH
DALLCIQTGSRLNETNRFKFNGDGYYLKSAAEMRALFSELPEACDNTLLVAEQCEVEFTE
GADLMPRFPLPPGEDETSWFIKEVERGLHKRWPGGIPDHVRKQADYEVGIITQMGFPGYF
LVVADFINWAKDNGIRVGPGRGSAAGSLAAYAMGITDLDPLAHGLIFERFLNPERVSMPD
VDIDFDDRRRGEVIQYVSQKYGEERVSQIVTYGTIKAKAAIKDAARVLDRPYSVGDELTK
LMPPDVMGKGIPLSGVFDPAHPRYKEAAEFRARYESDPGAAEVVDQARKLEGLKRQWGVH
AAGVIIGRYPLIDSIPIMRREADGAVITQFDYPTCETLGLLKMDFLGLRNLTVIDDALRN
IVANGKEPIDLDEISKDLTDPATYALLSRGDTLGVFQFDGGPMRSLLRLMRPDNFEDISA
VGALYRPGPMGANSHTNYALRKNGQQEITPIHPELAEPLEDILGTTYGLIVYQEQVMAIA
QKVAGYSLGKADLLRRAMGKKKKSVLDAEFVGFEAGMKERGFSDAAIKTLWDILVPFADY
AFNKAHSAAYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDRRPIYLAECRRMGIKVLPP
DVNESSWDFTAVGTDIRFGLASVRNVGHNVVDSIRRAREEKGAFKDFADFMRKIDTVACN
KKVIESLAKAGAFDSLGHSRQGIVAVHAQAVDSAMALKRREAEGQFDLFGSFGDEGADDP
FSGALDIAIPTADWSKSERLVFERDMLGLYVSDHPLHGVEHVLAANADTPIAEINAGGVE
DGANVTIAGILTSVAPRTNKQGAPWAIATLEDLESGIEVLFFPKTWAEVSEKVVRDQIVV
VKGRISRRDDQPSLFGSEVTIPELTEGARGPVLVSMAAARCTPPVVERLREVLGSHPGTT
EVQLKLVNGSRETVLRLDQGLRVRPSTALMGDIKALLGPTSVALL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccccgtcgtccgactcgttcgtgcacctgcacgtacacaccgagtactcgatg
ctcgacggagcggccaagctgccggaggtcaccaaggccgccgccgagcaggggatgccg
gcgctggcgatgaccgaccacggcaacgtcttcggcgcctacgacttctacaagcaggcc
aaggccgccggcgtgaagccgatcatcggcatggagggctactacaccccgggctcgcgc
ttcgaccgggcgccgttcgacttcggcgagaacctcatcgacgaggacggcgagggcggc
tcctcgcgcggcaaggccgcctacacgcacatgacactgctggcccgcacgacggagggg
atgcacaacctcttccgcatctcctcgatggccagcctcgaggggcagtaccgcaagccg
cggttcgaccgcgacctgctggagcgctacggcacgggtctcatcgccaccaccgggtgt
ccctccggtgaggtcaacatgtggctgcgggccggtaagcacgacagggcccggcaggcc
gccgccgacttccaggacatcttcggcaaggagaacttctacgccgaggtgatggaccac
gggctggccatcgagaagaagacccgcccggcgctgctggagatcgccaaggagctcggc
atcccgctgctgggcaccaacgacctgcactacacccaccgcgaggacgccgaggcgcac
gacgccctgctgtgcatccagaccgggtcgcggctcaacgagaccaaccgcttcaagttc
aacggcgacggctactacctgaagtccgccgcggagatgcgcgcgctgttcagcgagctg
cccgaggcgtgcgacaacacgctgctggtggccgagcagtgcgaggtggagttcaccgag
ggcgccgacctgatgccacggttcccgctgccgccgggggaggacgagacctcctggttc
atcaaggaggtcgagcgcgggctgcacaagcgctggccgggcggcatccccgaccacgtg
cgcaagcaggccgactacgaggtcgggatcatcacccagatgggcttcccggggtacttc
ctcgtggtcgccgacttcatcaactgggccaaggacaacggcatccgcgtcggcccgggc
cgtggctcggccgcgggctcgctggccgcgtacgccatgggcatcaccgacctcgacccg
ctggcgcacgggctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgac
gtcgacatcgacttcgacgaccgccgccgcggcgaggtcatccagtacgtctcgcagaag
tacggcgaggagcgggtcagccagatcgtcacctacggcaccatcaaggccaaggccgcg
atcaaggacgccgcccgcgtgctcgaccggccctactcggtcggcgacgagctcaccaag
ctcatgcccccggacgtgatgggcaagggcatcccgctgtcgggggtcttcgacccggcc
cacccgcgctacaaggaggccgcggagttccgggcccgctacgagtccgaccccggcgcg
gccgaggtcgtcgaccaggcgcgcaagctcgagggcctgaagcggcagtggggcgtgcac
gccgcgggcgtcatcatcggccggtaccccttgatcgacagcatcccgatcatgcggcgc
gaggccgacggcgcggtcatcacgcagttcgactacccgacctgcgagacgctcggcctg
ctgaagatggacttcctgggcctgcgcaacctcacggtcatcgacgacgcgctgcgcaac
atcgtcgcgaacggcaaggagccgatcgacctcgacgagatcagcaaggacctcaccgac
ccggccacctacgcgctgctgtcccgcggcgacaccctcggcgtcttccagttcgacggc
ggcccgatgcgctcgctgctgcggctcatgcggccggacaacttcgaggacatctccgcc
gtcggcgcgctctaccggcccggcccgatgggtgcgaactcgcacaccaactacgcgctg
cgcaagaacggccagcaggagatcacgccgatccacccggagctggccgagccgctggag
gacatcctcggcacgacctacggcctgatcgtctaccaggagcaggtcatggcgatcgcg
cagaaggtcgccgggtactccctcggcaaggccgacctgctgcgccgcgcgatgggcaag
aagaagaagtcggtcctggacgcggagttcgtcgggttcgaggccggcatgaaggaacgc
ggcttctccgacgcggcgatcaagacgctgtgggacatcctcgtcccgtttgccgactac
gccttcaacaaggcccactcggccgcctacggcctggtgtcctactggaccgcctacctc
aaggccaactacccggccgagtacatggccgggctgctgaccagcgtcggcgacgacaag
gaccgccggccgatctacctggccgagtgccggcggatgggcatcaaggtgctcccgccg
gacgtcaacgagtcgtcctgggacttcaccgccgtcggcaccgacatccgcttcggtctc
gcgtcggtgcgcaacgtcgggcacaacgtcgtcgactcgatccgccgggctcgcgaggag
aagggcgcgttcaaggacttcgcggacttcatgcgcaagatcgacacggtggcctgcaac
aagaaggtcatcgagtccctggccaaggccggggcgttcgactccctgggccactcccgt
cagggcatcgtcgccgtccacgcccaggccgtcgactccgcgatggcgctcaagcgcagg
gaggccgaggggcagttcgacctcttcggcagcttcggcgacgagggcgcggacgacccc
ttcagcggggcgctggacatcgcgatcccgacggcggactggtcgaagtccgagcggctg
gtgttcgagcgcgacatgctcggcctctacgtctccgaccacccgctgcacggcgtggag
cacgtgctcgccgccaacgcggacacgccgatcgcggagatcaacgccggcggtgtcgag
gacggcgcgaacgtcaccatcgccggcatcctcacctcggtcgcgccgcggaccaacaag
cagggcgcgccgtgggccatcgcgaccctcgaggacctcgagtccggcatcgaggtgctc
ttcttcccgaagacctgggcggaggtctcggagaaggtcgtccgcgaccagatcgtcgtg
gtcaaggggcggatcagccggcgcgacgaccagccctcgctgttcggctccgaggtcacc
atccccgagctcaccgagggcgcgcgcggcccggtgctcgtgtcgatggcggcggcccgg
tgcaccccgccggtggtcgagcggctccgcgaggtgctgggcagccacccgggcaccacc
gaggtgcagctgaagctggtcaacggcagccgggagacggtgctgcggctggaccagggg
ctgcgggtgcgacccagcacggcgctcatgggcgacatcaaggcgctgctgggcccgacc
agcgtcgccctgctgtga
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