Geodermatophilus obscurus: Gobs_3336
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Entry
Gobs_3336 CDS
T01163
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03030
DNA replication
gob03430
Mismatch repair
gob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gobs_3336
03430 Mismatch repair
Gobs_3336
03440 Homologous recombination
Gobs_3336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gob03032
]
Gobs_3336
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_3336
Enzymes [BR:
gob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Gobs_3336
DNA replication proteins [BR:
gob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Gobs_3336
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Gobs_3336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
DEDDh_C
TMV_coat
Motif
Other DBs
NCBI-ProteinID:
ADB75938
UniProt:
D2SAC3
LinkDB
All DBs
Position
3507362..3509191
Genome browser
AA seq
609 aa
AA seq
DB search
MPLSPARLAGTAARAAAGLPRFEQATIDELGTPLAEVTFVVVDLETTGGSPKDSAITEIG
AVKVRGGEVLGEFQTLVDPGCEIPPYISVLTGITSTMVAAAPRIGAVLPHFLEFARGAVL
VAHNAPFDLGFLKAACAANGIPWPATASVDTAVLARRLLSRDEVPNCKLATLAPYFRTST
EPCHRALADARATVDVLHGLFERLGPLGITSLEELTGLTRQVDPDRLRKRHLADAVPHGP
GVYLFRGPRDEPLYVGTSTDLRSRVRSYFTAGEQRSRMTEMVALSQRVDAIPCAHDLEAA
VRELRLIAEHKPRYNRRSRFPERALWVRLTEEPFPRLSVVRRVRPGAGVFLGPFPDRRAA
DAAVAAVHESLPLRQCTGRLSVRVLGTACALAGMGRCGAPCTGAQSVEEYGGIAAVLRTA
VAADPHALLAPLLARVERLAAEERYEDAAVLRDRAATLVRAVRRRQRLESLAAVPELVLA
RPDGEGGWQLSIVRRGRLVAAGCAARGSSVRATLEGLLATAETPLGPDGELAASVDETEL
VLRWMEKPGTRLVQVDGTLACPVPGTGGYTDFLDRVEAGRAGRDPFADGRSLGTRARPER
VSSGAAMSR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctctcccccgcccgcctcgccgggacggccgcccgggccgcggccgggctgccg
cgcttcgagcaggccaccatcgacgagctgggcaccccgctggcggaggtcaccttcgtc
gtcgtcgacctggagaccaccggggggtccccgaaggacagcgcgatcaccgagatcggc
gcggtcaaggtgcgcggcggggaggtgctcggcgagttccagaccctggtcgaccccggc
tgcgagatcccgccctacatcagcgtgctgaccgggatcacctcgacgatggtcgccgcg
gccccccgcatcggcgctgtcctgccgcacttcctcgagttcgcccgcggcgcggtgctg
gtcgcccacaacgcgccgttcgacctcggtttcctcaaggccgcctgcgcggcgaacggc
atcccctggcccgccacggcctcggtcgacaccgccgtcctcgcccgccggctgctcagc
cgcgacgaggtgcccaactgcaagctggccaccctcgcgccctacttccgcaccagcacc
gagccctgtcatcgggcgctggccgacgcccgtgccaccgtcgacgtcctgcacggcctg
ttcgagcggctcgggccgctgggcatcaccagcctggaggagctgaccgggctcacccgg
caggtcgaccccgaccggctgcgcaagcggcacctggccgacgccgtcccgcacggcccg
ggcgtctacctgttccgcggtccccgcgacgagccgctctacgtcgggacgtcgaccgac
ctgcgcagccgggtgcgcagctacttcaccgccggtgagcagcgcagccggatgaccgag
atggtggcgctctcccagcgggtcgacgcgatcccgtgcgcgcacgacctcgaggcggcc
gtccgcgagctgcggctgatcgccgagcacaagccgcgctacaaccggcgctcccggttc
cccgagcgcgcgctgtgggtgcggctgaccgaggagcccttcccccggctgtcggtggtg
cgccgggtgcgcccgggcgccggggtgttcctcggccccttccccgaccggcgggcggcc
gacgccgcggtggccgccgtccacgagtcgctgccgctgcgccagtgcaccggccggctg
tcggtgcgggtgctcggcaccgcctgcgcactggccgggatgggccgctgcggcgcaccg
tgcaccggcgcccagtcggtcgaggagtacggcgggatcgccgccgtcctgcggaccgcg
gtggccgccgacccgcacgcgctgctggcgccgctgctggcgcgggtggagcggctggcc
gccgaggagcgctacgaggacgccgccgtcctgcgcgaccgcgccgccaccctcgtgcgc
gcggtgcggcggcggcagcggctggagtccctggccgcggtgcccgagctggtgctggcc
cgcccggacggcgagggcggctggcagctgtccatcgtccgccggggccggctcgtggcc
gccgggtgcgcggcccgcggcagctcggtccgggcgaccctcgaggggctgctggcgacg
gcggagacgccgctgggccccgacggcgagctggccgcctcggtcgacgagaccgagctg
gtgctgcgctggatggagaagcccggcacccgcctggtccaggtcgacggcacgctggcc
tgcccggtgcccggcaccggcggctacaccgacttcctggaccgggtcgaggccgggcgc
gccgggcgcgacccgttcgccgacggccgctcgctgggcacccgggcacgccccgagcgc
gtctccagcggggccgccatgagccggtga
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