Geodermatophilus obscurus: Gobs_3960
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Entry
Gobs_3960 CDS
T01163
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gob
Geodermatophilus obscurus
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gob03016
]
Gobs_3960
Enzymes [BR:
gob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Gobs_3960
Transfer RNA biogenesis [BR:
gob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Gobs_3960
Prokaryotic type
Gobs_3960
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DUF2244
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ADB76527
UniProt:
D2SDW1
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All DBs
Position
complement(4157311..4158225)
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AA seq
304 aa
AA seq
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MGSRQDADVPPGLLLVDKPGGMTSHDVVARARRVLSVRRVGHAGTLDPMATGLLVLGVGT
ATRLLGHVGGHDKTYEATIRLGQTTVTDDREGEVLVTTPAGHLDDDAVTAALAAQTGPLL
QVPSSVSAVKVAGRRSYDRVRAGEEVVLEPRAVTVHRLDVHRVTRPAPDLVDVDVTVSCT
AGTYVRAIARDAGAALGVGGHLTALRRTASGPFSVTEAAAVEEAGQALAAGGGAGVLGLT
DAARAVFPVRTLTEEEARALGYGQRIPATGTPGLHAALDGADRLVALVEDAGATARVAVG
FPTG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccgccaggacgccgacgtccccccgggcctgctgctggtcgacaagcccggc
ggcatgacctcgcacgacgtcgtcgcccgcgcccggcgggtgctctcggtccgccgggtc
ggccacgccggcacgctcgacccgatggccaccggcctgctggtcctcggcgtcgggacg
gcgacccggctgctcggccacgtcggcgggcacgacaagacctacgaggcgaccatccgc
ctcggccagaccaccgtcaccgacgaccgcgagggcgaggtcctcgtcaccaccccggcc
gggcacctcgatgacgacgccgtcaccgccgccctggccgcgcagaccggcccgctgctg
caggtgccctcgtcggtgagcgcggtgaaggtcgccggccgccgctcctacgaccgggtg
cgcgccggcgaggaggtggtgctggagccgcgggcggtgaccgtccaccggctcgacgtc
caccgcgtcacccgccccgcgccggacctggtggacgtcgacgtgaccgtttcgtgcacc
gccggcacctacgtccgcgcgatcgcgcgcgacgccggcgccgccctcggcgtgggcggg
cacctcaccgcgctgcgccgcaccgcctccggcccgttctcggtgaccgaggccgcggcg
gtcgaggaggccgggcaggcactggccgccggtgggggagcgggggtgctcggcctcacc
gacgccgcccgcgccgtcttcccggtgcggacgctgaccgaggaggaggcgcgcgccctc
gggtacgggcagcggatccccgccaccggcacccccggcctgcacgccgcgctggacggc
gcggaccgactggtcgccctggtcgaggacgccggtgccaccgcccgcgtcgccgtgggc
ttcccgaccggctag
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