Geodermatophilus obscurus: Gobs_4029
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Entry
Gobs_4029 CDS
T01163
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Gobs_4029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gob03019
]
Gobs_4029
03009 Ribosome biogenesis [BR:
gob03009
]
Gobs_4029
03036 Chromosome and associated proteins [BR:
gob03036
]
Gobs_4029
Enzymes [BR:
gob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Gobs_4029
Messenger RNA biogenesis [BR:
gob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Gobs_4029
Ribosome biogenesis [BR:
gob03009
]
Eukaryotic type
90S particles
RNase
Gobs_4029
Prokaryotic type
rRNA processing factors
Gobs_4029
Chromosome and associated proteins [BR:
gob03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Gobs_4029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADB76594
UniProt:
D2SE28
LinkDB
All DBs
Position
complement(4227597..4228409)
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AA seq
270 aa
AA seq
DB search
MGTTATGTQPTAGGAAGRSPAGVAHADRAAAWLLDALGVELPGGLLALALTHRSYAYEHG
GLPTNERLEFLGDSVLGLVVTDELYQRHPDLPEGRLAKLRASVVNMTSLAGVARRLGDGG
LGPHLLLGRGEETTGGRDKDSILADAVEAIIGAVHVGLGLDTAAAIVHRLFDPLLDQAAT
RGAGLDWKTSLQELGARLGLGAPTYVVEDTGPDHAKTFTAAVVLAGTVYGRGAGRTKKAA
EQEAAEAAWHALSDGAGPDGAAVAAGSGAS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggggacgacggccaccggtacccagcccactgcgggcggggccgccggccgttccccg
gccggtgtcgcgcacgccgaccgcgcggccgcctggctcctcgacgccctgggtgtcgag
ctgcccggcggcctgctggcgttggcgctgacccaccgctcctacgcctacgagcacggc
gggctgccgaccaacgagcggctggagttcctcggggactcggtgctcggcctggtcgtc
accgacgagctctaccagcggcaccctgatctccccgagggccggctggccaagctgcgg
gcctcggtggtcaacatgacgtcgctggccggcgtcgcccgccggctcggcgacggcggc
ctggggccgcacctgctgctcggccgcggtgaggagaccaccggcggccgggacaaggac
tcgatcctcgccgacgccgtggaggcgatcatcggggccgtgcacgtcgggctcggcctg
gacaccgccgcggcgatcgtgcaccggctgttcgacccgctgctggaccaggccgccacc
cgcggcgccggcctggactggaagaccagcctgcaggagctcggcgcccggctggggctc
ggtgcgccgacctacgtggtcgaggacaccggccccgaccacgccaagaccttcaccgcc
gccgtcgtcctcgccggcacggtgtacggccgcggcgccggccgcaccaagaaggccgcc
gagcaggaggccgccgaggccgcctggcacgccctctccgacggcgccggccccgacggc
gcggccgtcgcggccggatccggggcgagctga
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