Geodermatophilus obscurus: Gobs_4154
Help
Entry
Gobs_4154 CDS
T01163
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob00300
Lysine biosynthesis
gob00470
D-Amino acid metabolism
gob01100
Metabolic pathways
gob01110
Biosynthesis of secondary metabolites
gob01120
Microbial metabolism in diverse environments
gob01230
Biosynthesis of amino acids
Module
gob_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gobs_4154
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gobs_4154
Enzymes [BR:
gob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Gobs_4154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADB76717
UniProt:
D2SET1
LinkDB
All DBs
Position
complement(4366624..4368114)
Genome browser
AA seq
496 aa
AA seq
DB search
MRAHPAGPLHGGMTPPPSVGLPPADLGALDPQVWPRSARRVDGELHLGGRPVTELARTHG
TPLFVLDEGDFRSRAADFAAAFTDADVHYASKAFLCGQIARWIADDGLHLDACSGNELAL
ALAAGFPAGRIALHGNNKSLVELQLAVDAGIGHVVLDSFDEVDRLVPLAAARVAAGGAPV
PVLIRTTVGIEAHTHEFIATAHEDQKFGFSLATGDALTAAVRVIREPALRLTGLHSHIGS
QIFDTAGFEAAAHRVVGLLGQVRQATGEVLGELNLGGGFGIAYLPGDDPVSPGDVARRLR
SAVAAECDALGLPVPRLAVEPGRAIAGPGTVTLYEIGTIKPVRLGSGGQGAPQVRNYVSV
DGGMSDNIRTALYDASYTCVLANRESDAPPALCRVVGKHCESGDILVRDLWLPADVQPGD
LLAVAATGAYCWSMASNYNYLLKPPVVAVRDGAATEIVRRQTLSDVFALDAVLADVPAPA
VAPSQPAPEHPAGVTS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgagagcgcacccggccgggccgctgcacggggggatgaccccgccgccgtccgtcggc
ctgccaccggccgacctcggcgcgctggacccgcaggtctggccgcgctcggcccggcgg
gtcgacggcgagctgcacctgggcggccggccggtcaccgagctggcgcgcacccacggc
acgccgctgttcgtcctcgacgagggcgacttccggagccgcgcggccgacttcgccgcc
gccttcaccgacgcggacgtgcactacgcctccaaggcgttcctctgcggtcagatcgcc
cgctggatcgccgacgacggcctgcacctcgacgcctgctcgggcaacgagctggccctc
gccctggccgccggcttcccggccgggcggatcgccctgcacggcaacaacaagtcgctc
gtcgagctgcagctggccgtcgacgccggcatcggccacgtcgtcctcgactccttcgac
gaggtcgaccggctggtgccgctggccgccgcccgggtcgccgccggcggcgcgccggtg
ccggtgctgatccggacgacggtcggcatcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcgggttctcgctggccaccggcgacgcgctgaccgccgcg
gtccgggtgatccgcgagccggcgctgcggctgaccggcctgcacagccacatcggctcg
cagatcttcgacaccgccgggttcgaggcggccgcgcaccgggtggtgggtctgctcggc
caggtgcggcaggccaccggcgaggtgctgggggagctcaacctcggcggcggcttcggc
atcgcctacctgcccggcgacgacccggtcagccccggcgacgtcgcccggcggctgcgc
agcgccgtcgccgccgagtgcgacgcgctcgggctgccggtgccccggctggccgtcgag
cccgggcgcgccattgccggccccggcacggtgacgctctacgagatcggcacgatcaag
ccggtccggctcggcagcggcgggcagggcgccccgcaggtgcgcaactacgtgtccgtc
gacggcgggatgagtgacaacatccgcaccgcgctctacgacgcctcctacacctgcgtg
ctggccaaccgggagtccgacgccccgccggcgttgtgccgggtggtcggcaagcactgc
gagagcggggacatcctggtacgcgacctgtggctgcccgccgacgtccagcccggcgac
ctgctcgcggtcgccgcgaccggcgcctactgctggtcgatggcgagcaactacaactat
ctgctcaagccgccggtggtcgccgtgcgggacggcgccgccacggagatcgtccggcgt
cagacactgtcggacgtgttcgccctcgacgccgtcctcgccgacgtgcccgcgcccgcg
gtcgcgccgtcccagcccgcgcccgagcaccccgccggggtgacctcgtga
DBGET
integrated database retrieval system