Geodermatophilus obscurus: Gobs_4360
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Entry
Gobs_4360 CDS
T01163
Name
(GenBank) putative ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gob
Geodermatophilus obscurus
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_4360
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Gobs_4360
Archaeal homologous recombinant proteins
Gobs_4360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
ABC_tran
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
ADB76916
UniProt:
D2SG48
LinkDB
All DBs
Position
complement(4583209..4586169)
Genome browser
AA seq
986 aa
AA seq
DB search
MRLHSLSITAFGPFAGTETVDVDAVARDGLFLLWGPTGAGKTTLLDAVVYALYGTVPGAR
GEEKRLRSDHADAATRTEVACELTLAGERLLVVRRPEQTRPKKRGAGETTEQAKLTVQRW
DGAAWEPVSTRIDEGSEYLRVRLGLSAEQFCQVVLLPQGDFARFLRAEPEDRARLLRTLF
DVGRFARAEDWLAAERRAAEETLRTDRERLGRLLDRVAHAADVAVPEELAPELVGARPGA
SVNAWVAAVRSRAAGDLTAATAAAEAAAAASARLDGELAEARGLADRHARRDRARQELAE
LTVEEEQLGLLRARADAGRRAEALRDVLESAGRTALAAEAAATALAAARAAWAEVADGRD
ADALTARELRDEAAAARALAPEADRAAGLARELGRLGRVVEALTARCEEGVRTAASWPGR
VAEAQRRLDAASAAAVRLPGLTAAADAARTALDAAHRAERVAAHLAAARETAEAARTAWV
DAREALVELRAARLDGMAAELAAGLAPGADCPVCGATEHPRPAEHTGPRVSADDEERARA
VVDTAEERTAAARRTVEERERELAVLRERAGELPAAELAACAEQARAERAEVAALAGDVD
AARRELADREAGRDAATTRLAADREELQRRTAERDGRADALTELTARLDAARGADTDLPA
RVRRLTRTAERCEAALSAEAEELRARAAADAAREAAARRATAAGFADLVDAADALLDAGE
LARLERRLRQHDEARSVAAATLADPELTDLPARPDVPALQQRCAQLTAHREEAVARLEQA
RRCAGALDALAGEVVSAEVELAERRAWAGRVAGLADLVNGRGANTLRMRLQSFVLAARLE
QVAEVASRRLQEMSGGRYTFLHSDAQARHGARGGLGLDVFDEYTGTRRPTKTLSGGESFM
ASLALALGLADVVTAEAGGIQMDTLFVDEGFGTLDALALDAVMNVLDELRRGGRTVGVIS
HLEELRTRIPTRLEVVAGRHGSRLAG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcactccctctcgatcaccgccttcgggccgttcgccggcacggagaccgtc
gacgtcgacgcggtcgcccgcgacgggctcttcctgctgtggggccccaccggcgcgggc
aagacgacgctgctggacgccgtcgtctacgccctgtacggcaccgtgccgggagcgcgc
ggcgaggagaagcggctgcgcagcgaccacgccgacgccgccacccgcaccgaggtcgcc
tgcgagctgaccctcgccggcgagcggctgctcgtcgtccgccggcccgagcagacccgg
ccgaagaagcgcggcgccggcgagaccaccgagcaggccaagctcaccgtgcagcggtgg
gacggcgccgcctgggagccggtgagcacccgcatcgacgagggctcggagtacctgcgg
gtgcggctgggcctgtccgccgagcagttctgccaggtggtgctgctgccccagggcgac
ttcgcccgcttcctgcgcgccgagcccgaggaccgcgccaggctgctgcgcaccctcttc
gacgtgggccgcttcgcgcgggcggaggactggctggccgccgagcgccgggccgccgag
gagacgctgcgcaccgatcgagagcggctgggacggctgctcgaccgggtcgcccatgca
gccgacgtcgcggtgcccgaggagctggcgcccgagctggtcggcgcccggcccggcgcg
tcggtgaacgcctgggtcgccgccgtgcgcagccgggccgccggggacctcaccgctgcc
accgctgcggccgaggccgcagccgcggccagcgcccgcctggacggcgagctggccgag
gcgcgcgggctcgccgaccggcacgcccggcgcgaccgcgcccgccaggagctggccgag
ctgaccgtcgaggaggagcagctgggcctgctgcgggcccgcgccgacgccggacgccgg
gcggaggcgctgcgcgacgtcctggagtccgccggccgcaccgcgctggccgcagaggcc
gccgccaccgccctggcggccgcgcgcgctgcctgggccgaggtcgccgacggccgcgac
gccgacgcgctcaccgcccgggagctgcgcgacgaggccgccgcggctcgggcgctggcg
cccgaggccgaccgcgcggccgggctggcccgcgagctcggccggctgggccgggttgtc
gaggcgctcaccgcccgctgcgaggagggggtgcgcaccgcggcgagctggcccggacgc
gtcgccgaggcgcagcgccggctcgacgccgcctcggccgccgccgtgcggctgccgggc
ctcaccgcggccgccgacgccgcccgcacggcgctcgacgccgcgcaccgcgccgagcgg
gtcgccgcccacctggccgccgcccgggagaccgcggaggccgcgcgcaccgcgtgggtc
gacgcccgcgaggccctcgtcgagctgcgcgcggcacgcctcgacggcatggccgccgag
ctcgcggcgggtctggcgcccggcgccgactgccccgtctgcggcgccaccgagcacccg
cggccggccgagcacaccggcccgcgcgtctccgccgacgacgaggagcgggcgcgggcg
gtcgtcgacacggccgaggaacgcaccgccgccgcccgccgcacggtcgaggagcgggag
cgggagctcgccgtcctgcgcgagcgggccggggagctgccggccgcggagctcgccgca
tgcgccgagcaggcccgcgccgagcgcgccgaggtcgccgcgctcgccggggacgtcgac
gccgcccggcgcgagcttgccgaccgggaggccggccgggacgccgcgacgacgaggctg
gccgccgaccgcgaggagctgcagcggcgcaccgcggagcgggacggccgcgcagacgcc
ctcaccgagctcaccgcgcggctcgacgccgcccgcggggcggacaccgacctgcccgcg
cgggtccggcggctgacccggaccgcggagcgctgcgaggccgcgctgtccgccgaggcc
gaggagctgcgggcccgcgctgccgccgacgccgcgcgggaggccgcggcccggcgcgcc
accgccgccggtttcgccgacctggtcgacgccgcggacgcgctgctcgacgcgggggag
ctggcccgcctcgagcggcggctgcggcagcacgacgaggccaggtcggtcgccgcggcc
acgctcgccgacccggagctgaccgacctgcccgcccggccggacgtcccggccctccag
cagcgctgcgcgcagctcaccgcccaccgggaggaggcggtcgcccggctggagcaggcc
cggcgctgcgccggggccctggacgcgctggccggcgaggtcgtctccgcggaggtcgag
ctcgccgagcgccgcgcgtgggccgggcgggtcgcgggcctggccgacctggtcaacggc
cgcggcgccaacacgctgcggatgcggttgcagtccttcgtgctggccgcccggctcgag
caggtcgccgaggtcgccagccggcggctgcaggagatgtccggcggccgctacaccttc
ctgcacagcgacgcccaggcccggcacggcgcccgcggcggcctgggcctggacgtcttc
gacgagtacaccggcacacggcgtcccaccaagacgctctccggcggggagagcttcatg
gcgtcgctggcgctggcactcggactcgccgacgtcgtcaccgccgaggccggcggcatc
cagatggacacgctcttcgtcgacgaggggttcggcaccctcgacgcgctggccctcgac
gcggtgatgaacgtgctcgacgagctgcgccgcggcggccggacggtcggcgtcatcagc
cacctggaggagctgcgcacccggatccccacccggttggaggtcgtcgccgggcggcac
gggtcccgtctggccggctga
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