Geodermatophilus obscurus: Gobs_4430
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Entry
Gobs_4430 CDS
T01163
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03420
Nucleotide excision repair
gob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gobs_4430
03430 Mismatch repair
Gobs_4430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gob03400
]
Gobs_4430
Enzymes [BR:
gob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gobs_4430
DNA repair and recombination proteins [BR:
gob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Gobs_4430
MMR (mismatch excision repair)
Other MMR factors
Gobs_4430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DUF6930
Motif
Other DBs
NCBI-ProteinID:
ADB76984
UniProt:
D2SGB6
LinkDB
All DBs
Position
complement(4664066..4666363)
Genome browser
AA seq
765 aa
AA seq
DB search
MSSVQQALPGTASLQRSASGSVGRELDRMLAGLNGPQRQAVVHEGSPLLIVAGAGSGKTR
VLTHRIAYLLGARGVQPGEVLAITFTNKAAGEMKERVAALVGPRARAMWVSTFHSMCVRI
LRAEAAKLGLKSSFTIYDQGDSVRLMTMVARDLDLDAKRYPGRSLAAQVSNLKNELVDEE
SFSPQTAPEKVLKEAYTLYQRRLREAHAMDFDDLIMTTVHLLQAFPDVAEHYRRRFRHVL
VDEYQDTNHAQYVLVRELVGTGEGPVPPAELCVVGDADQSIYAFRGATIRNIDEFERDYP
QATTILLEQNYRSTQRILKAANQVIAKNTGRRPKNLWTDAGDGELIEGYVAENEHDEAAW
VAEQIDALVDEGEARPKDIAVFYRTNNASRVFEEVFIRVGMPYKVVGGVRFYERKEVRDA
LAYLKLVANPADVVSLRRIINVPKRGIGDKAEGCIESFADRERIAFGSALRRCSEVTTLA
PRSLKAVQEFVALLEEFEQLAETGSGPAALLESILDRTGYLAELQASTDPQDEGRVDNLN
ELISVAAEFEAANPGGSVPDFLEQVSLVADADQIPVAGDDAGVVTLMTLHTAKGLEFPVV
FLTGMEDGVFPHLRALGDPRELEEERRLAYVGITRARQRLFISRATVRTSWGQPAYNPPS
RFLDELPSDTVRWAGKEPVPAPSTGYRSAQQRVAATGLSTGGLRGGSGNRAVISVEVGDR
VSHDAFGLGTVVEVNGIGDKAQATVDFGSGGTKRLVLRYAPLVKL
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtccagcaggccctccccggcaccgcgtccctccagcgctccgcctccggc
tcggtggggcgggagctggaccgcatgctcgccggcctcaacggcccccagcggcaggcc
gtcgtccacgagggcagcccgctgctcatcgtcgccggggccggctcgggcaagacccgg
gtgctgacccaccggatcgcctacctgctcggcgcccgcggcgtgcagcccggcgaggtc
ctggcgatcaccttcaccaacaaggccgccggggagatgaaggagcgggtcgccgcgctc
gtcggcccgcgcgcccgggcgatgtgggtgtcgacgttccactcgatgtgcgtgcgcatc
ctgcgcgccgaggccgccaagctcggcctgaagtcgtcgttcacgatctacgaccagggc
gactcggtccggctcatgacgatggtcgcccgcgacctggacctcgacgccaagcgctac
cccggccgcagcctggccgcgcaggtgtcgaacctgaagaacgagctcgtcgacgaggag
tccttcagcccccagacagcgccggagaaggtgctgaaggaggcctacacgctctaccag
cggcggctgcgcgaggcgcacgccatggacttcgacgacctgatcatgacgacggtgcac
ctgctgcaggcgttcccggacgtcgcggagcactaccgccgccgcttccggcacgtgctg
gtcgacgagtaccaggacaccaaccacgcgcagtacgtgctggtccgcgagctggtgggc
accggcgaggggccggtgccgccggccgagctgtgcgtcgtcggtgacgcggaccagtcg
atctacgccttccgcggcgcgacgatccgcaacatcgacgagttcgaacgcgactacccg
caggccacgacgatcctgctggagcagaactaccgctccacgcagcgcatcctcaaggcg
gccaaccaggtcatcgcgaagaacaccggccgccgtcccaagaacctgtggaccgacgcc
ggcgacggcgagctgatcgagggctacgtcgccgagaacgagcacgacgaggccgcctgg
gtcgccgagcagatcgacgcgctcgtcgacgagggggaggccaggcccaaggacatcgcg
gtcttctaccggaccaacaacgcctcccgtgtcttcgaggaggtgttcatccgcgtcggc
atgccctacaaggtcgtcggcggggtgcgcttctacgagcgcaaggaggtccgggacgcg
ctggcctacctgaagctggtcgccaacccggccgacgtcgtcagcctgcgccggatcatc
aacgtgcccaagcgggggatcggcgacaaggccgagggctgcatcgagtccttcgccgac
cgggagcggatcgcgttcggctcggccctgcggcggtgctccgaggtcaccaccctggcg
ccgcggtcgctcaaggcggtccaggagttcgtcgcactgctggaggagttcgagcagctg
gccgagaccggctccggaccggccgcgctgctggagagcatcctcgaccgcaccggctac
ctcgccgagctgcaggccagcaccgacccgcaggacgagggccgcgtcgacaacctcaac
gagctcatctcggtggccgcggagttcgaggcggccaacccgggcggctcggttcccgac
ttcctcgagcaggtgtcgctggtcgccgacgccgaccagatccccgtcgccggggacgac
gccggcgtcgtcacgctgatgaccctgcacaccgccaagggcctggagttcccggtcgtg
ttcctgaccggcatggaggacggcgtcttcccgcacctgcgcgccctcggtgacccgcgc
gagctggaggaggagcgccggctggcctacgtcggcatcacccgggcacggcagcggctg
ttcatctcgcgggccacggtgcgcaccagctgggggcagccggcctacaacccgccgtcc
cgcttcctcgacgagctgccgtcggacaccgtgcggtgggcgggcaaggagcccgtgccg
gcgccgagcaccggctaccgctcggcgcagcagcgggtggcggccaccgggctgtccacc
ggcgggctgcgcggcggctccggcaaccgggccgtcatctccgtcgaggtcggggaccgg
gtgagccacgacgccttcgggctgggcaccgtcgtggaggtcaacggcatcggcgacaag
gcgcaggcgaccgtggacttcggctccggcggcacgaagcgcctcgtcctgcgctacgcg
ccgctggtcaagctctga
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