Geodermatophilus obscurus: Gobs_4452
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Entry
Gobs_4452 CDS
T01163
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gob
Geodermatophilus obscurus
Pathway
gob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gobs_4452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gob03019
]
Gobs_4452
03110 Chaperones and folding catalysts [BR:
gob03110
]
Gobs_4452
03029 Mitochondrial biogenesis [BR:
gob03029
]
Gobs_4452
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gob04147
]
Gobs_4452
Enzymes [BR:
gob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Gobs_4452
Messenger RNA biogenesis [BR:
gob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Gobs_4452
Chaperones and folding catalysts [BR:
gob03110
]
Heat shock proteins
HSP60 / Chaperonin
Gobs_4452
Mitochondrial biogenesis [BR:
gob03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Gobs_4452
Exosome [BR:
gob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Gobs_4452
Exosomal proteins of other body fluids (saliva and urine)
Gobs_4452
Exosomal proteins of breast cancer cells
Gobs_4452
Exosomal proteins of colorectal cancer cells
Gobs_4452
Exosomal proteins of bladder cancer cells
Gobs_4452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADB77002
UniProt:
D2SH48
LinkDB
All DBs
Position
complement(4685870..4687510)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKIIKFNEDARRALERGVDKLADAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAREVE
LEDPYENLGAQLAKNVATKTNDVAGDGTTTATVLAQALVHEGMRNVAAGASPTALGTGMR
AAAEAVSKALDEVAIPVSDEQAIAGVATVSAQDAEVGQLIGQAMEKVGKDGVITVEESTT
LSTELDVTEGVQFDKGYLSPYFVTDQEAMEAVLEDTLVLLVSGKIGALADLLPLLEKVLS
TGGRPLLIVAEDVEGEALSTLVVNSIRKTIKVVAVKSPYFGDRRKAFMTDLAVVTGGQVV
SEDVGLKLDQVGLEVLGTARRVTVTKDETTIVDGGGTGEAIGDRVAQIRREIEATDSDWD
REKLQERLAKLAGGIGVIRVGAATEVEMKEKKHRIEDAIAATRAAVEEGVVPGGGSALVH
AAAAVDALDLSGDELTGARVVRRALDAPLVRIAENAGFEGRVVVAKVREAGVGQGFNAAT
GEYGDLAAQGVIDPVKVTKAALGNAVSIAAMVLTTDSAVVEAPEEDEPAGAGHHTHGHSH
GHGHSH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcaagttcaacgaggacgcccgccgtgcgctcgagcgcggcgtggac
aagctcgccgacgcggtcaaggtgaccctcggtccgcgcgggcgcaacgtcgtcctcgac
aagaagttcggcgccccgaccatcaccaacgacggcgtgaccatcgcccgtgaggtcgag
ctcgaggacccctacgagaacctcggcgcccagctggccaagaacgtggccaccaagacc
aacgacgtcgccggcgacggcaccaccaccgcgaccgtgctggcccaggccctggtgcac
gagggcatgcgcaacgtcgccgccggtgccagcccgacggctctcggcaccggcatgcgc
gccgccgccgaggcggtctccaaggccctcgacgaggtcgccatcccggtctccgacgag
caggccatcgccggcgtcgcgaccgtctcggcgcaggacgccgaggtcggtcagctgatc
ggccaggccatggagaaggtcggcaaggacggcgtcatcaccgtcgaggagagcaccacc
ctctccaccgagctcgacgtgaccgagggcgtgcagttcgacaagggctacctctcgccc
tacttcgtcactgaccaggaggcgatggaggccgtcctcgaggacaccctcgtgctgctg
gtcagcggcaagatcggcgcgctggccgacctgctcccgctgctggagaaggtgctctcc
acgggcggtcgcccgctgctcatcgtcgccgaggacgtcgagggcgaggcgctgtccacc
ctcgtcgtgaactcgatccgcaagaccatcaaggtcgtcgcggtgaagtcgccgtacttc
ggcgaccgccgcaaggcgttcatgaccgacctcgccgtcgtcaccggcggccaggtggtc
agcgaggacgtcggcctcaagctcgaccaggtcggcctggaggtgctcggcaccgcgcgc
cgggtcaccgtcaccaaggacgagaccacgatcgtcgacggtggcggcaccggtgaggcc
atcggcgaccgggtggcgcagatccgccgcgagatcgaggcgaccgactccgactgggac
cgcgagaagctgcaggagcggctggccaagctcgccggcggcatcggtgtcatccgcgtc
ggcgcggccaccgaggtcgagatgaaggagaagaagcaccgcatcgaggacgccatcgcc
gccacccgcgccgcggtggaggagggcgtcgtccccggtggtggctcggcgctggtgcac
gcggccgcggccgtggacgccctcgacctgtccggggacgagctcaccggtgcccgcgtg
gtccgccgggcgctggacgccccgctggtccgcatcgccgagaacgccggcttcgagggt
cgcgtcgtggtggccaaggtccgcgaggccggggtcgggcagggcttcaacgccgcgacc
ggcgagtacggcgacctggccgcccagggcgtcatcgacccggtcaaggtcaccaaggcc
gcgctgggcaacgccgtctcgatcgccgcgatggtgttgaccaccgactccgccgtcgtc
gaggcgccggaggaggacgagccggccggggccgggcaccacacccacggccactcgcac
ggccacgggcacagccactga
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