Gordonia sp. YC-JH1: CXX93_00125
Help
Entry
CXX93_00125 CDS
T05256
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00860
Porphyrin metabolism
goc01100
Metabolic pathways
goc01110
Biosynthesis of secondary metabolites
goc01120
Microbial metabolism in diverse environments
goc01240
Biosynthesis of cofactors
Module
goc_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
goc_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CXX93_00125
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
goc04147
]
CXX93_00125
Enzymes [BR:
goc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
CXX93_00125
Exosome [BR:
goc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CXX93_00125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AUH67061
LinkDB
All DBs
Position
complement(22217..23203)
Genome browser
AA seq
328 aa
AA seq
DB search
MTGPFIRPRRLRQTPAMRRLVAETRLHPSQLVLPMFVADGIDEPRPISSMPGVVQHTVDS
LRAAAHDAVDAGVGGLMLFGVPRAEDKDATGSAGDRPDGVLNRGLEALRADFGDETVLMA
DTCLDEFTDHGHCGVLTESGDVDNDATLRRYESLAVAQARAGAHVVGPSGMMDGQVAAIR
DALDAEGFIDTTILAYTAKYASAFYGPFREAVDSSLVGDRRTYQQDPANRLESARELLAD
LEEGADMVMVKPAMSYLDIVRDVADRTDAPVAAYQVSGEYAMIAAAAERGWIDFDAAIDE
SVLSIARAGASIVLTYAAPEVARRLARR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggccgttcatccgcccgcgccggctgcggcagacccccgccatgcggcggctg
gtcgccgagacccggctgcatccgtcccagctggtgctcccgatgttcgtcgccgacggc
atcgacgagccccggcccatctcctcgatgcccggcgtggtgcaacacaccgtcgactcg
ctgcgcgccgcggcgcacgacgcggtcgacgcgggagtcggtggactcatgctgttcggg
gtaccgcgagccgaggacaaggatgcgaccggttcggccggcgaccgccccgacggagtg
ctgaaccgcgggctcgaggccctgcgggcggacttcggcgacgagaccgtcctgatggcc
gacacctgtctggacgagttcaccgatcacggacactgcggggtgctgaccgagagcggt
gacgtcgacaacgacgccaccctgcgccgatacgagtcgctcgccgtcgcgcaggcgcgg
gccggtgcgcacgtggtggggccgagcgggatgatggacggccaggtggccgcgatccgc
gacgctctcgacgccgagggcttcatcgacacgaccattctcgcgtacacagccaagtac
gcttcggcgttctacgggccgttccgggaggccgtcgattcatcactcgtcggcgaccgc
cgcacatatcagcaggatccggcgaaccggctggagtccgcgcgcgaactgctcgccgac
ctcgaagagggcgccgacatggtgatggtcaaacccgccatgagctacctcgacatcgtc
cgggacgtcgccgaccggaccgacgcgcccgtcgccgcgtaccaggtcagcggtgagtac
gcgatgatcgccgcggccgccgagcgcggctggatcgacttcgacgcggccatcgacgaa
tcggtgctgtcgatcgcccgcgccggtgcgtcgatcgtgctgacgtacgccgcgcccgag
gtggcgcgtcgactcgcccgccggtga
DBGET
integrated database retrieval system
