Gordonia sp. YC-JH1: CXX93_01195
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Entry
CXX93_01195 CDS
T05256
Name
(GenBank) DUF3367 domain-containing protein
KO
K16648
arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
CXX93_01195
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
goc01003
]
CXX93_01195
Glycosyltransferases [BR:
goc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CXX93_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GT-C_AftD
CBM_AftD
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-ProteinID:
AUH67234
LinkDB
All DBs
Position
241704..245897
Genome browser
AA seq
1397 aa
AA seq
DB search
MLTRAQALIVAVVALVVCLLQRPGRISPDTKLDLTADPIGFLTRAAHLWSPDAPMGQIQN
QAYGYFFPHGLFFAVGEILHVPPWITQRFWWAILLTVGFLGVVRLAEALRVGSFTSRLIA
GWVFVLAPRVMTTLGTISSETLPMMLAPWVLLPVVRALDASDPRPLWRNAARSACAVALM
GAVNAVATAAAVAVSAIWWLLATARRDRGRRRRGLVFGAWWAAGLAMACLWWVVPLLILS
RVSPPFLDFIESASVTTEWTSLTEVLRGTDSWTPFVSPERAVGAVLVSEPAAVVATGILA
AAGLAGLTMRAMPHRRRFLTILVTGLLALCLGYPGAFGSPVRETVIAFLDGPGAALRNIH
KFDPLVRLPLAMGIAHLLARVRVPIRSRGAERGVAAALVVVIAAFGSGSLLWTGGLAPAK
SYRAVPDYWQQTADWLDAAQAGSSTPSRALVVPGAPFADQIWGLTRDEPLQALAHSPWAV
RDAIPLTPPGAIRAMDSVQRALSSGRGSPGLAATLAEQGVGYLVLRADLDAVTSRSARPL
LVAQAIRNSPGLTEAARFGPDVSPPTLDGVVVDDGLRPPMPAVTVYRVGPPDGTGATTAG
APGLVDVGAMTRVTGGPEALAAVEDARSRAGEEPLGPALLTADARRAGLPDAPAVVTDSP
VDRETDFGRVDDHSSAIRGPDDPRLTKNAAPDYPVPGQPLVRAQWLLDNQPGMVRVTSSG
SAADATQPGRTSPANSTAAAFDGDPDTAWVSRGLESAVGRWLSIDFTHPQDDLAVTVTTA
KALGPDVSTLLVSSDSGSTVAQGVKPGVPTRILVPSGPTSSVQVRAIDTADGSAGNQFAI
AELSVADANTGVPLSIRQRTVLPTLDAADDVSGWVLSPELGPIPDCVTAADGRVRCSPAV
GLSPETPGVFSRTLSVPSQTDADVHVTLRPKSGGELSDLLARTGVIRAEAQSSVADPRGN
ASAAVDGDPNTTWTAPDPDTFPKGRKPVLTLHLPAPREVSGIRLQTPADYPAHPTRVSVE
LRDGDRTVARTTARVGTDGVLSVPAARADTVVLTIEEQSDLIDVNDLGFAKDAPVGISEA
QVLPGGPNVPDDDHRIIEIGCATDPSGPYGMGVTAAGQMLRLHVRTTVGALRRGESVSAT
ACPGPSLRLPAGEQEVAVNPGRAFTVDAVTLRRPGAEASSPAVTHPQVTEWAPTDRRLTV
DAADTDRILFVPESTNPAWHARADGRELKPVVVNGWQQGWIVPAGTGGTVALTVDLDSPY
RWALGAGLALVVVLFAVAFGPRFGRRRCEPAVRPDDGVRAGRGAVAAASAAALAAAFLLT
GWPGALIAAATGAVTWRLSARLRPALTFTAMLAATVALATGPWHSGTAYTGYSGWAQAFA
LIAVSAAVAAALFGRPR
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
attctgacgcgggcgcaggcactcatcgtcgctgtcgtggcgctggtggtctgtctactc
cagcgccccggccgcatctcgcccgacaccaagctggacctgaccgccgatccgatcggg
ttcctcacccgcgccgcgcacctgtggtcgccggatgccccgatgggccagatccagaac
caggcctacggatacttcttcccgcacggcctgttcttcgccgtcggcgagatcctgcac
gtgccgccgtggatcactcagcgattctggtgggcgattctgctgaccgtcggcttcctg
ggcgtggtccgtctcgccgaggcgctgcgcgtcgggtcgttcacatcgcggctgatcgcc
ggttgggtcttcgtactggccccccgcgtgatgaccacgctgggcaccatctcctcggag
acgctgccgatgatgctggcgccctgggtgctgctcccggtggtccgggctctcgacgcg
tccgacccccgtccactgtggcgcaacgcggcccggtccgcatgcgcggtggcgctgatg
ggtgcggtgaacgccgtcgccacggctgcggcggtggcggtgtcggcgatctggtggctg
ctggcgactgcgcggcgcgaccggggacgccgccgtcgcggactggtcttcggcgcatgg
tgggcggcgggtctggcgatggcgtgcctgtggtgggtggtgccgctgctgatcctctcg
cgggtctccccgccgttcctcgacttcatcgagtcggcgagcgtcaccaccgaatggacc
tccctcaccgaagtgctgcgcggcaccgactcgtggacgccgttcgtctccccggaacgc
gctgtgggcgccgttctggtctccgagccggccgcggtggtcgcgaccggcatcctcgcc
gccgccgggttggccggtctcacgatgcgggcgatgccgcaccgccgccgcttcctgacc
atcctggtgaccggcctgctcgccttgtgcctcggatatccgggagcattcggttcgccc
gtgcgtgagaccgtcatcgccttcctcgacggtccgggcgccgcgctgcgcaacatccac
aagttcgatccgctggtccggctccccctcgcgatgggaatcgcgcatctgctcgcgcgt
gtccgtgtcccgatccgcagccgcggtgccgaacgcggggtggccgccgcactggtggtg
gtgatcgccgcgttcggctccgggtcgttgctgtggaccggcgggctggcaccggccaag
agctaccgcgccgtccccgactactggcagcagacggccgactggctcgacgccgcgcag
gccggctcctcgactccgtcgcgcgccctggtggtcccgggagcgcccttcgccgaccag
atctggggtctcacgcgcgacgaaccgctgcaggcgctggcgcactcgccgtgggccgtc
cgcgacgcgattcccctgacgcctccgggcgccatccgcgcgatggactcggtgcaacgg
gcgctgagctcgggccgcggatcaccgggactggccgcgacactcgccgagcagggtgtc
ggatacctggtgctgcgggccgatctggacgcggtgacgtcacggtcggcacgaccgctg
ctggtggcgcaggcgatccgcaactcacccggactgacggaggcggcccggttcggtccc
gacgtctcaccgccgacgctcgacggcgtggtcgtggacgacggactgcgtccgccgatg
ccggcggtgacggtctaccgggtcggaccgcccgacggcaccggtgccacgaccgccggc
gcgcccggactggtggacgtcggcgcgatgacgcgggtgaccggcggaccggaggccctc
gccgcggtggaggacgcccgcagccgagccggagaggaaccgctgggtccggcgctgctg
accgcggacgcgaggcgcgcgggcctgcccgacgctccggcggtggtgaccgactcccct
gtcgaccgggagaccgacttcgggcgggtcgacgaccattcctcggctattcgcggcccc
gacgatccccggctgaccaagaacgcggcgccggactacccggtgccgggccagccgctg
gtccgcgcgcaatggctgctcgacaaccagccgggcatggtgcgcgtgaccagttcgggc
tcggccgccgacgcgacgcagcccggccggacgtcgcctgccaattccaccgccgccgcc
ttcgacggcgatccggacaccgcctgggtcagtcgcggtctggagtcggcggtcggcagg
tggctctcgatcgacttcacccatccgcaggacgacctcgcggtgaccgtcacgacggcc
aaggcgctcgggccggacgtctcgacgctgctggtctcgtccgattccggcagcaccgtg
gctcagggagtgaaacccggagtgccgacccggatcctggtgccgtcggggcccacgtcg
agcgtccaggtccgcgccatcgacaccgccgacggctcggccggtaatcagttcgcgatc
gccgaactgtcggtcgccgacgcgaacaccggtgtcccgctgtcgatccggcagcgcacg
gtgctgccgacactcgacgccgcagacgacgtgtccggctgggtgctctcccccgaactc
ggtccgatcccggattgcgtcaccgcggcggacggccgggtgcgctgctcgccggcggtg
gggttgagtccggagacgccgggtgtgttctcccggaccctgtcggtgccgtcgcagacc
gacgccgatgtgcatgtcacgctgcgaccgaagtccggcggtgaactctcggatctgctg
gcccgcaccggcgtgatccgcgcggaggcgcagtcgtcggtggccgatccgcgcggcaac
gcatcggccgccgtcgacggtgatccgaacaccacgtggaccgcaccggatccggacacg
ttcccgaagggaaggaaacccgttctgacccttcatctgcccgcccctcgcgaagtgtcc
gggatccgtctccagacgcccgcggactatccggcgcacccgacccgcgtgtccgtggag
ttgcgggacggtgatcggacggtggcgcggacgacagcgcgggtcggcacggacggggtg
ctgtcggttcccgccgcccgcgccgacaccgtggtgctgacgatcgaggagcagagcgat
ctgatcgacgtcaacgatctcggtttcgcgaaggacgcaccggtcggcatcagcgaggcc
caagtgctgccgggcggcccgaacgtacccgacgacgaccatcgcatcatcgagatcggc
tgcgccacagacccgtccggcccgtacggcatgggtgtcacggcagccggccagatgctc
cgactgcatgtccgcactacggtgggcgcgctgcgccgcggcgagagcgtatcggcgacc
gcgtgccccggcccgtcgctgcgactgccggcgggtgagcaggaggtcgcggtgaatccg
ggacgcgccttcaccgtcgacgcggtgaccctccggcgtcccggcgcggaggcctcctcg
cctgcggtgacgcacccgcaggtgaccgaatgggcgcccacggaccggaggctgacggtg
gacgccgccgacaccgaccgcatcctgttcgttcccgagagcacgaatcccgcctggcat
gcacgcgccgacggccgagaactgaagccggtcgtggtgaacggctggcagcagggctgg
atcgtgccggcgggaacgggcggcaccgtcgcgctcaccgtcgacctcgactcgccgtac
cggtgggcgctgggcgccggtctggcgctggtggtggttctgttcgccgtcgccttcggt
ccgaggttcggacggcgccgctgcgagccggccgtgcggccggacgacggcgtgcgcgcc
ggacgaggcgcggtcgccgcggcatccgccgcggccctcgcggcggcgttcctgctgacc
ggctggccgggggcgctgatcgcggcggcgaccggggccgtcacctggcggctctccgcc
cgcctacgaccggcgctgacgttcacggcgatgctcgcggcgacggtggcgctggccacg
gggccctggcattcgggcaccgcctacaccggctacagcggctgggcccaggcgttcgcg
ctgatcgccgtcagcgcggcggtggcggcggcgctgttcggccggccgcggtga
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