Gordonia sp. YC-JH1: CXX93_02115
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Entry
CXX93_02115 CDS
T05256
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
goc01004
]
CXX93_02115
Lipid biosynthesis proteins [BR:
goc01004
]
Polyketide synthase
Modular PKS
CXX93_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
Thiolase_N
Lipase_3
Motif
Other DBs
NCBI-ProteinID:
AUH67369
LinkDB
All DBs
Position
complement(438236..443605)
Genome browser
AA seq
1789 aa
AA seq
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MSETENTAPSDSTAPSDTTGPTERTGPSESTESPAGRAVSNGETVGDLTVDELRDWLRNW
VSRATGVAVEQISDDRPMEEFGLASRDAVALAADVEDFTGVILTATAAYNHPTIASLAKR
IIEGDPDEGLDVEADRFWERERSADDDIAIVGLATRFPKAGTTPESTWEALISGVDGITD
LPDDRWLEFKADPRLAEAIEKGNVRGGYLDDVTGFDADFFQMSPREVENVDPQQRLALEL
TWEALEHAHIPPSDLRGGQVGVFMGTSTNDYQLLATLGLGEGASETAAYALTGTATSIIA
NRVSYFFDFHGPSLAIDTACSSSLVAVHEGVRSLRNGDSDVVIAGGVNMLITPAATLGFD
QIGAQAPDGRIKAFSSDANGMIRAEGGGVFVLKRMADARRDGDTVLAVIAGSAVNSDGRS
NGIFAPNPEAQVEVLRSAYADAAIDPRTVDYVEAHGTGTVLGDPIEADALGRVVGRGRSG
DAPMLLGSAKTNFGHMESAAGAGALAKVVLSLQNDKLPASLNYAGPNPYIQFEATNLRVI
TEPTEWPRYSGHAVSGVSGFGFGGTNAHVVVREVLPSDFEDRAASPADADAAAGVPVPDD
LDDDDFLTEAERAVLAAQAKREPVAAEAPEADPAEGFAPAAVPGAVVPLVISGFLASRRR
KAAAELVEWLESDEGRQTPLAEIGRALAHRNHGRTRSVVMARTYEDAVKGMRAVAEGKSL
PFVYTCDSPDAASAVWLLSGFGSQHRKMAKQLYTENPVFAKYADRVDAYIQRELGYSMVE
IFLDDARTYEIETAQIGIYTIQVALADTMRHYGAEPGVLVPHSMGEASAAYISGGLSLED
ATRVICQRSRLMGEGEAMLTGDAVRFMALVEYSAEDINDVLVDYPDLEICVYAAPTHTVI
GGPGPQVDAIVARAEAEGKLGRKLQTKGASHTSQMDPLLGELSYEITGIEPQPLKYGVYS
SVDRETFYRPGTPDVFTIDYYLKGLRHSVWFAQAIAKSVEAGHRTFVELSPNPAVLISVA
ATTFGAGVHDAELIETLRRKEDESYGLVNALMKLYVHGHPVDVAALFGTGPDQRFANIPR
TRFERKPYWIDAVISGGSGAGSVPGAHVALPDGRHAWEVNAAAVTDPRELVLAAAKQVLG
SGAAVAAVESLGDFPTDGTVTTTLTGHPGGAAISVHAGPQGGFALLYQAAVTGGTVREPV
PSATGADAQTPAEAAKASGFVDEKVVVEDEVVDVIGDRWSPDSGESVGDRLAVIVGESMG
YDPEDLPREIPLIELGLDSLMAVRIKNRVEYEFEIPQLQLQAMRQADLSDVEKFVAFAVT
HRDQLDDLEKATGGGELDTAALNAYIDAELAKDALKGQAPDAPEPAKQVEPVEPTTSASE
ESSRSQVSEAPKMAETATDTPPAQAPTITDQASVAEASGTDVPPRDAAERLTYGAYAVVT
GKSAGGVFNKLPVLDDETAEKLTERLNERTGGEIDVEDVLDSETIEELSNYVRQHMEASA
DIDGFVRFLRVPKNSDGTPKHTFDTAAGDPTPMLVFHPAGGNTSAYEALLKRLPDDQPVI
GFDRVEGTIEERVRQYMPRLREVQPHGPYVLVGWSLGGALAYGAAQLLREEGEEIAFVGL
IDVVRPTRDVPDTPENKRARLERWKAFAIKTYGLDEDVPIPMDRLVAADDNEQFAIITEM
MSMSGTKIPGGIIEHQRTSFLDNRALTEIDPTPYDGKVVLYRADKMHDGAIELEPQWAEI
DEDGRWGEVVDDLEIIHIGGDHLAIVDEPYVAKVAADLARRMADISTEK
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactgagaacaccgcgccgtctgacagcactgcgccctccgacaccactggg
cccaccgagcgcaccgggccctccgagagcactgagtccccggcaggccgcgccgtctcg
aacggcgagaccgtcggcgacctgaccgtcgacgaactgcgcgactggctccgcaactgg
gtgtcgcgggccacgggtgtggccgtcgagcagatctccgacgaccgcccgatggaggag
ttcggactggcctcgcgggacgccgtcgcgctcgcggccgacgtcgaggacttcaccggg
gtcatcctcaccgcgaccgccgcgtacaaccacccgacgatcgcgtcgctggccaagcgg
atcatcgaaggcgatcccgacgagggactcgacgtcgaggccgaccggttctgggagcgt
gagcgatcggccgacgacgatatcgccatcgtcggcctggccacccggttccccaaggcg
ggcaccaccccggagtcgacgtgggaggcgctgatcagcggcgtcgacggcatcaccgat
ctgccggacgaccggtggctcgagttcaaggccgacccgcgactggccgaggccatcgag
aagggcaacgtccgcggcggctacctggacgacgtgacgggcttcgacgccgacttcttc
cagatgagcccgcgcgaggtggagaacgtcgacccgcagcagcggctcgcactggagctg
acgtgggaggcgctggagcacgcgcacatcccgccgagtgacctgcgcggtggccaggtg
ggcgtcttcatgggcacctcgaccaacgactaccagttgctggcgaccctcgggctcggc
gaaggcgcatcggagacggccgcgtacgcgctgaccggtacggcgacgtcgatcatcgcg
aaccgagtgtcgtacttcttcgacttccacggcccgtcgctcgccatcgacacggcgtgc
tcgtcgtcgctggtcgccgttcacgagggcgtgcgcagcctgcggaacggtgattcggat
gtcgtcatcgccggcggcgtcaacatgctcatcaccccggccgcgacgctcggcttcgac
cagatcggcgcacaggcgccggacggtcggatcaaggccttctcctcggacgccaacggc
atgatccgcgccgagggcggcggcgtcttcgtcctcaagcggatggccgacgcccgccgc
gacggcgacaccgttctcgcggtgatcgccggttccgcggtcaactccgacggacgctcg
aacggcatcttcgcgccgaatcccgaagcccaggtggaggtgctgcgatcggcgtacgcc
gacgccgccatcgacccgcgcaccgtcgactacgtcgaggcgcacggcaccggaaccgtg
ctcggcgacccgatcgaggccgatgcgctcggccgcgtggtcggtcgcggccgcagcggc
gacgcgccgatgctgctcggctcggccaagaccaacttcggtcacatggagtcggcggcg
ggcgccggtgcgctcgccaaggtggtgctctcgcttcagaacgacaaactccccgcttcg
ctgaactacgcaggacccaacccgtacatccagttcgaggccaccaacctccgggtgatc
accgaaccgaccgagtggccgcggtactccgggcacgccgtctccggtgtctccggattc
ggtttcggcggaaccaacgcgcacgtcgtggtccgcgaggtgctgccgtccgacttcgaa
gaccgcgcggcctcgcccgccgacgccgacgccgccgccggggtcccggtgcccgacgat
ctcgacgacgacgacttcctcaccgaggccgagcgggcggtgctcgcggctcaggccaag
cgtgagccggtcgccgcggaagcacccgaggccgatccggcggagggcttcgcgccggcc
gccgtccccggcgctgtagtgcccctggtgatctccggttttctggcctcgcgccggcgc
aaggccgccgcggagctggtcgagtggctggagtcggacgagggcaggcagacgccgctg
gcggagatcggccgtgccctggctcaccgcaaccacggccgcacgcgctcggtggtgatg
gctcgtacgtacgaggacgcggtcaagggcatgcgcgcggtcgccgaaggcaagtcgctg
cccttcgtctacacctgcgactctcccgacgccgcgtccgcggtgtggttgctctccggt
ttcggctcgcagcatcgcaagatggccaagcagctgtacaccgagaacccggtgttcgcg
aagtacgccgaccgcgtcgacgcctacatccagcgggagctggggtattcgatggtcgag
atcttcctcgacgatgcgcggacgtacgagatcgagaccgcgcagatcggcatctacacg
atccaggtggcgctggccgacacgatgcgccactacggcgccgagcccggcgtccttgtt
ccgcactcgatgggcgaggcgtcggccgcctacatcagcggcggactgtcgctggaggac
gccacgcgggtgatctgccagcgttcgcgcttgatgggcgagggcgaggcgatgctgacc
ggcgacgcggtgcgcttcatggcgttggtcgagtacagcgcggaagacatcaacgacgtc
ctcgtggactacccggacctcgagatctgcgtctacgcggctcccacgcacacggtgatc
ggcggtccgggaccacaggtggacgcgatcgtggcgcgtgccgaggccgagggcaagctg
ggccgcaagctgcagaccaagggcgcgagccacacctcgcagatggacccgctgctcggt
gaactctcctacgagatcaccggcatcgagccgcagccgttgaagtacggcgtctacagc
tcggtggaccgcgagaccttctaccgtccgggcacccccgacgtgttcacgatcgactac
tacctcaagggcctgcgccacagtgtgtggttcgcccaggcgatcgcgaagtcggtggag
gccgggcaccgcacgttcgtcgaactctcgccgaatcccgccgtcctgatctcggtggct
gccaccacgttcggcgccggggtgcacgacgcggagctgatcgagacgctgcgccgcaag
gaggacgagagctacgggctcgtcaacgcgctgatgaagctgtacgtccacgggcatccg
gtggatgtggcggcgctgttcggcaccggaccggatcagcggttcgcgaacattccgcga
acgcggttcgagcgcaagccgtattggatcgatgcagtgatctccggtggctcgggtgcc
ggttcggtgccgggcgcgcacgtcgcgctgcccgacggcaggcacgcctgggaggtcaac
gccgcggcggtcaccgatccgcgggagctggtgctcgccgcggcgaagcaggtgctcggt
tccggcgccgcggtggcggcagtcgagtcgctcggtgatttcccgaccgacggcacggtc
acgaccacgctcaccggccacccgggtggcgcggcgatcagtgtgcacgccggtccgcag
ggcggattcgcgctgctctaccaggccgcggtgaccggcggcacggtgcgcgagccggtg
ccgtccgcgaccggcgcggacgcgcagacgcctgccgaggccgcgaaggcctccggcttc
gtcgacgagaaggtggtcgtcgaggacgaggtcgtcgacgtgatcggcgaccggtggagc
ccggactccggagagagcgtgggcgaccgcctcgcggtcatcgtcggcgagtcgatgggc
tacgaccccgaggacctgccgcgggagatccccctcatcgaactgggcctcgactccctg
atggcggttcgcatcaagaaccgcgtcgagtacgagttcgagatcccgcagctgcagctg
caggcgatgcgacaggctgatctgtcggacgtcgagaagttcgtcgccttcgcggtcacc
caccgcgatcagctcgacgacctggagaaggccaccggcggcggagaactcgacaccgcc
gcgctgaacgcctacatcgatgcggaactggccaaggatgctttgaagggacaggcgccc
gatgcgccggagcctgcaaagcaggtcgagcccgttgagccgacgacgagcgcgagcgag
gagtcgagtcggagccaggtgagcgaagcgcccaagatggccgagaccgccaccgacacc
ccgcccgcacaggctcccaccatcaccgaccaggcgtcggtggcggaggcttcgggcacc
gatgtgccgccgcgcgatgctgccgaacgcctgacctacggtgcgtacgcggtggtgacc
ggcaagtcggccggtggcgtcttcaacaagctgccggtgctcgacgacgagaccgcggag
aagctcaccgagcggctgaacgagcgcaccggaggcgagatcgacgtcgaggacgtcctc
gattcggagacgatcgaggagctctcgaactacgttcgtcagcacatggaggcgtctgcc
gacatcgacggcttcgtgcggttcctgcgtgtcccgaagaattccgacggcacgccgaag
cacacgttcgacaccgccgcgggcgacccgacgccgatgctggtgttccaccccgcgggc
ggcaacacctcggcctacgaggcactgctcaagcggctgccggacgaccagccggtgatc
ggcttcgaccgagtcgagggcaccatcgaagagcgggtacgtcagtacatgccgcgcctg
cgcgaggtgcagccgcacggtccgtacgtgctggtgggctggtctctgggcggggcgctg
gcctatggcgctgcacagctgctccgcgaggagggcgaggagatcgccttcgtcggactg
atcgatgtggtgcgcccgacccgggacgtgcccgacaccccggagaacaagcgagcgcgg
ctggagcgttggaaggcgttcgcgatcaagacttacgggctcgacgaggacgtgccgatc
ccgatggaccggctcgtcgccgccgacgacaacgagcagttcgcgatcatcaccgagatg
atgtcgatgtcggggaccaagattccgggcgggatcatcgagcatcagcggacgtcgttc
ctcgacaaccgtgcgctcaccgagatcgatcccactccgtacgacggcaaggtggtgctc
taccgcgcggacaagatgcacgacggagccatcgaactcgagccgcagtgggccgagatc
gatgaggacgggcgctggggcgaggtggtggacgatctggagatcattcacatcggcggc
gaccacctggccatcgtggatgagccctacgtcgcgaaggtcgcagccgacctggcccgc
cgcatggcagatatcagtaccgagaagtga
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