Gordonia sp. YC-JH1: CXX93_02175
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Entry
CXX93_02175 CDS
T05256
Name
(GenBank) stage II sporulation protein SpoIID
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
goc01011
]
CXX93_02175
Enzymes [BR:
goc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CXX93_02175
Peptidoglycan biosynthesis and degradation proteins [BR:
goc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CXX93_02175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
LGFP
Motif
Other DBs
NCBI-ProteinID:
AUH70063
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All DBs
Position
complement(458384..459964)
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AA seq
526 aa
AA seq
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MTFAALGLAPALLAGGLVVGGTDVFSSDGVALAANTPIVLDGHGHGHGRGLGQWGAYGYA
KQGWSADQILRHYYGNTVAGKVSTPDVTVSLSEKASVGVHAAAGMRVGTQTVAPGQAVSL
SGGTATITDGCGGAVVSTVPATQVDPINPGTNRPDQELLTFCNGGDKYRGSIGIGPGGVY
NKLHVDDYVKGVIPKESMPSWGDTGGFEALKAQAVAARSYVLAGLAAGRKIDNTQASQMY
HGASGEDPRTSRAADATAGQIRLLNGKPALTEFSASTGGYTAGGLFPAVRDAGDSIAPDH
SWSATVSASSIGSAFGVGSLKSFEVIEANGLGEGGGRVVKVRVTGTGGTVEASGNDARVK
LQLKSDWFSVRGQKSMPKIVKPQVGPDSPGGGLLDLSPLGAVLNQIVPGLSAVGLPDVTG
IVGEVTPMLEKLVTEGLKQLTAKQVDLKQVNLERSDNSQGSTGTVAKPELLTDGKGLPGL
VQVLENGVIYFSPLTGVHALMGQSLTDFLNAGGLAALGFPTRDGLG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
ctgaccttcgctgccctgggcctggcgcccgcgttgctcgcgggtggtctggtcgtcggc
ggcaccgacgtgttctcctccgacggggtcgccctggcggcgaacacgccgatcgtcctc
gacgggcacgggcacgggcacggacgcggtctgggccagtggggtgcgtacggctacgcg
aagcaggggtggtcggcggatcagatcctccggcactactacggaaacacagtcgcgggg
aaggtgagcacccccgacgtcacggtctcgctgagcgagaaggcgtcggtcggtgttcat
gcggctgcgggaatgcgcgtaggcacgcagacggtcgctcccgggcaggcggtcagcctg
tccgggggtacggccacgatcaccgacggctgcggcggcgccgtcgtcagcactgttccg
gccacgcaggtggacccgatcaacccggggaccaaccggccggaccaggaactgctgacc
ttctgcaacgggggcgacaagtaccgcggctccatcggcatcggtccgggcggcgtctac
aacaagctgcacgtggacgactacgtcaagggtgtgatccccaaggagtcgatgccgtcc
tggggtgacaccggcggattcgaggcgctcaaggcgcaggcggtcgcggcgcgctcctat
gtgttggccggactggccgcgggtcgcaagatcgacaacacccaggcgtcccagatgtat
cacggagcctccggcgaggatccccggaccagccgggccgccgacgccaccgccgggcag
atccggttgttgaacggcaaacccgctctcaccgagttctcggcctccaccggcgggtac
accgcgggcggactcttcccggccgtccgcgatgcgggcgactccatcgcacccgaccat
tcgtggtccgcgaccgtcagcgcgtcgagcatcggctccgcgttcggcgtcgggtcgctc
aagagcttcgaggtgatcgaggccaacggtctcggcgaaggcggcggccgcgtcgtcaag
gtccgggtgaccggcaccggcggaacggtcgaggcctcgggcaacgacgcgcgggtcaag
ctgcaactgaaatcggactggttctccgtgcggggccagaaatcgatgccgaagatcgtc
aagccgcaggtgggaccggactcgccgggagggggactgctcgacctcagcccgctgggc
gccgtcctcaaccagatcgtgcccgggctgtcggcggtgggactgcccgacgtgaccggc
atcgtgggcgaggtcaccccgatgctggagaaactggtcaccgagggactcaagcagctc
accgcgaagcaggtggatctgaagcaggtgaatctggagcgcagcgacaactcgcagggc
tccacgggcaccgtcgccaaaccggaactgctcaccgacggcaagggactgccgggtctg
gtgcaggtgctggagaacggcgtcatctacttcagcccgctcaccggcgtgcacgcgctg
atgggccagtcgctgaccgacttcctgaacgcgggcggcctggccgcgctcggtttcccc
acgcgggacggcctgggctga
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