Gordonia sp. YC-JH1: CXX93_02435
Help
Entry
CXX93_02435 CDS
T05256
Symbol
lysS
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CXX93_02435 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
goc01007
]
CXX93_02435 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goc03016
]
CXX93_02435 (lysS)
Enzymes [BR:
goc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CXX93_02435 (lysS)
Amino acid related enzymes [BR:
goc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CXX93_02435 (lysS)
Transfer RNA biogenesis [BR:
goc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CXX93_02435 (lysS)
Prokaryotic type
Other AARSs
CXX93_02435 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
BOF
DUF6458
DUF5336
Motif
Other DBs
NCBI-ProteinID:
AUH67419
LinkDB
All DBs
Position
complement(511140..514532)
Genome browser
AA seq
1130 aa
AA seq
DB search
MPELENGSRDAMPSAATREASRHATANRRSSAIVRRISNPSGFGRRIPRIAGTVVGLLAT
VSLLSTLIPPFRHLIRIPRMFVDDYLFPMPSTSLAWTVVLGLLAVSLSLRKRVAWWITVA
YLSLYTVLNLLVVLVAASDPGWADEWRQSVSGLIVNIALMVVLIAGYRQFNTRVRRGALR
WAAVVLVGGLAAGTLAGWALLSVAPGTVAPNERLPYAFNHVVAFATIDVKPFANHHAPWM
VNWLLGLFGALALICAAVVLFRSQRLSSLMTAEDERLVRALVDAYGDEDSLGYFSTRRDK
AVVFSPDGRAAITYRVEMSTALAGGDPVGDPDSWTEAIAEFFALCETYGWHPAVLGASTR
GAEVLHAAGLDAINLGDEAILNAADFSLSGPTMKGVRGSVSRVRRLGVTVRMRRMSELPW
AEVEGVVRRADEWRDTEQERGFAMALGRVGDPADGDALLVEAVEAEGTADEKVIGMLSFV
PWGRSGVSLDLMRRDRNGPNGVVETMVSELAQNAESVGVTKISLNFATFRDVFEHGPQVG
ARPVLRLVYAVLKFFSKFFQMESLYKSNAKYQPRWKPRYICYQDAKVIPRVALAAMVAEG
FVQLPGKHWRARHYRSGASSVPDGIDVDELVAELESESRTRGIAEVRRPEQVRVRLDKLE
RLIDDGVDPYPVAQPPTHTVAQAAAASLGTVVRIAGRLTRKRDFGRVTFADVHDQSGEIQ
ILVEPAAMGEHSLDFASTVDLGDLVEITGTIGTSRSGELSVLATQWRLNGKCLHPLPDKW
SGLTDPEARVRQRYLDLAVNARSRELLATRSAVVRALRDHLASEGFLEVETPILQQVHGG
ANATPFRTHINAYDMDLYLRIAPELFLKRLCVGGIEKVFEIGRNFRNEGVDFSHNPEFTS
LEAYAAHHDYESMMTLARELIVAAATAANGRAVIERTGDAGVETVDISGQWPVKSVHAAV
SEAAGVKITPETGVDELRHVCRGLDIAFRPDWDAGHLVLELYEHLVEARTTFPTFYKDFP
TSTSPLTRAHRLVDGVAERWDLVAWGVELGTAYTELTDPVEQRTRLTEQSILAAGGDSEA
MELDEDFLTALEYAMPPTGGLGLGVDRIVMLITGQSIRESLAFPLAKPHQ
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactggagaacggatcccgtgacgcgatgccgagtgcggcgacgcgggaggcg
agtcgacacgcgaccgccaatcgtcgatcgtccgcgatcgtccggcgcatctccaatccc
agcggcttcggccggcggataccgcggatcgcggggaccgtcgtggggttgctcgcgacc
gtctcactgctgtcgacgctgatcccgccgttccggcatctgatccgcattccgcggatg
ttcgtcgacgactacctgttccccatgcccagcaccagcctcgcgtggacggtggttctg
gggctgctcgcggtgtcgctgtcgctgcgcaaacgtgtggcgtggtggatcacggtcgcc
tacttatcgctctacaccgtgctgaacctgctggtggtcctggtcgccgcgtcggacccg
ggctgggcggacgagtggcggcagtcggtgagcggtctgatcgtcaacatcgcgctgatg
gtcgtgctgatcgcgggctaccggcagttcaacacccgtgtccggcgcggcgccctccgg
tgggcggcggtggtgctggtcggcggactggccgccggaaccctcgccggctgggcgctg
ctcagcgtcgcacccggtaccgtggcaccgaacgaacggctgccgtacgccttcaaccac
gtggtcgccttcgcgaccatcgatgtgaaacccttcgcgaatcatcacgcgccctggatg
gtgaactggctgctcggtctgttcggggcgctcgcgctgatctgtgcggccgtcgtgctg
ttccggtcgcagcggctcagctcgctcatgaccgctgaggacgaacgcttggtgcgtgcg
cttgtggacgcctacggcgacgaggactcgctcggctacttctcgacgcggcgcgacaag
gcggtcgtcttctcccccgacggacgtgcggcgatcacctatcgagtggagatgtcgaca
gcgctcgccggcggcgatcccgtgggcgatccggactcctggaccgaggccatcgccgag
ttcttcgcgctctgcgagacctatgggtggcatccggcagtgctcggcgccagcaccagg
ggagccgaagtcctgcacgctgccggcctcgacgcaatcaacctcggcgacgaggcgatc
ctgaacgcggccgacttcagcctgtccgggcccaccatgaagggtgtgcgggggtcggtg
tcgcgggtcagacggctcggtgtgaccgtccggatgcggcgcatgagcgaactgccgtgg
gccgaggtggaaggagtggtccggcgcgccgacgaatggcgcgacaccgagcaggagcgc
ggcttcgcgatggcgctgggccgggtgggtgacccggcggacggcgacgcactgctcgtc
gaggcggtggaggccgagggcaccgccgacgagaaggtcatcggcatgctgtcgttcgtt
ccctggggccgcagcggtgtctcgctggacctgatgcggcgcgaccgcaacggcccgaac
ggcgtggtggagacgatggtgtccgagctggcgcagaacgccgagtcggtcggcgtcacg
aagatctccctcaacttcgccaccttccgagacgtcttcgagcacgggccgcaggtgggg
gcccgaccggtgctgcggctggtgtacgcggtgctgaagttcttctcgaagttcttccag
atggagtcgctgtacaagtcgaatgcgaagtatcagccccggtggaagccgcgctacatc
tgctaccaagacgccaaggtgattccacgcgtcgctctggccgcgatggtcgccgaggga
ttcgtccagcttcccggcaagcactggcgggccaggcactatcggagcggtgcgtcgtcg
gtcccggacggcatcgacgtcgacgaactggtcgccgaactcgaatcggagtcgcggacc
cgagggatcgccgaggtgcgtcggcccgaacaggtgcgcgtgcggctggacaagctggag
cggctgatcgacgacggagtggacccgtacccggtggcgcaaccgcccacgcacaccgtg
gcccaggccgcggccgcgtcgctcgggaccgtggtgcgcatcgccgggaggctcacgcgc
aaacgcgacttcggtcgagtcacgtttgccgacgtgcacgaccagagcggcgagatccag
atcctcgtggaacccgcggcgatgggggagcactcgctcgacttcgcgtccaccgtggat
ctgggagacctcgtcgagatcaccggaaccatcgggaccagccgatcgggcgagctgtcg
gtgctcgcgacgcagtggcgtctgaacggcaagtgtctgcacccgcttccggacaaatgg
agcggtctcaccgatccggaggcccgggtgcggcagcgctacctcgacctggcggtcaac
gctcgcagccgcgaactgctggcgacccgcagcgccgtggtccgcgccctccgcgatcat
ctcgcctcggagggattcctggaggtggagacaccgatcctgcagcaggtgcacggaggg
gcgaacgcgaccccgttccgcacgcacatcaacgcctacgacatggacctgtacctgcgc
atcgcccccgaactgttcctgaaacgactgtgcgtgggaggcatcgagaaggtcttcgag
atcggccggaacttccgcaacgaaggcgtcgatttctcacacaacccggagttcaccagt
ctggaagcctatgcggcacaccatgattacgagtcgatgatgacgctcgcgcgggagctg
atcgtcgcagcggccaccgccgccaacgggcgggcggtgatcgagcgcaccggggacgcc
ggcgtggagacggtcgacatctccggacagtggccggtgaagtccgtccacgccgcggtg
tcggaggctgcgggagtgaagatcactccggagacgggggtggacgagttgcggcacgtg
tgccgcgggctcgacatcgcgttccgccccgactgggacgccgggcatctggtcctggaa
ctgtacgaacacctggtggaggcacggaccacgttcccgacgttctacaaggacttcccg
acctcgacgtcgccgctcacccgcgcgcaccgcctcgtcgacggcgtcgcggagcgctgg
gatctggtggcctggggtgtggaactcggcaccgcctacaccgaactgacggacccggtg
gaacagcgaacgaggctcactgagcagtcgatcctggcggcgggcggtgactcggaggcg
atggaactcgacgaggacttcctcaccgcgctcgagtacgcgatgcctccgaccggcggt
ctcggcctcggcgttgaccgcatcgtcatgttgatcaccggtcagtcgatccgcgagtcg
ctcgcgttcccgctggccaagccgcaccaatag
DBGET
integrated database retrieval system
