Gordonia sp. YC-JH1: CXX93_02820
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Entry
CXX93_02820 CDS
T05256
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goc03021
]
CXX93_02820
Transcription machinery [BR:
goc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CXX93_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_IclR
HTH_23
KORA
Sigma70_ECF
MarR
HTH_3
MarR_2
HTH_28
DUF7343
HTH_24
LacI
Motif
Other DBs
NCBI-ProteinID:
AUH67474
LinkDB
All DBs
Position
607083..607835
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AA seq
250 aa
AA seq
DB search
MTDEYHRVRELLRRRADIPVTDPRNDRLRDEAIEACLPLAGHIAQRYRERGESMDDLIQV
ARLGLVHAVDRFDPSMGTDFLSFAVPTITGEVRRHFRDRSASIRIPRSAGELRSRIREAE
ESFAQAHGRMPGVAEIAEALDEPESAVRRAQAASAAQSTVSLDGSTSGTDDARSLLETVG
SDEPGYEQVERSLTLRPALRRLPERNRRIVGMRFFERRSQSDIARRMGISQMHVSRLLAS
SLGQLRTQIA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagtaccaccgtgtccgtgaacttctgcgccgacgcgcggacatccccgtc
accgacccgcggaacgaccgtctccgcgacgaggcgatcgaagcctgtctgccgctggcc
ggacacatcgcccagcggtaccgcgaacgcggagagtcgatggacgacctgatccaggtg
gcgcgcctggggctggtgcacgcggtggaccgattcgatccctcgatggggaccgacttc
ctgtccttcgcggtaccgaccatcaccggcgaggtgcgacgccacttccgcgaccgatcg
gcgtcgatccggattccacgcagcgccggtgaactccgcagccgaatcagggaggccgag
gagtccttcgcccaggcccacggacgcatgcccggcgtcgccgagatcgccgaggcgctc
gacgagccggagtccgctgtacgacgtgcgcaggccgcgtcggccgcgcagtccaccgtc
tctctcgacggcagcacgtcgggtaccgacgacgcacgctcgctgctcgagacggtcggc
tccgacgagcccggctacgagcaagtggaacgctcgctcactctccggccggccttgcgc
cgcctccccgaacggaaccggcggatcgtcggcatgaggttcttcgagcgtcgttcacaa
agcgacatcgcgcgccgaatgggtatctctcagatgcacgtctctcgtcttctggcgtcc
tcgctgggtcagctgcgcacccagatcgcctga
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