Gordonia sp. YC-JH1: CXX93_02960
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Entry
CXX93_02960 CDS
T05256
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goc03032
]
CXX93_02960
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_02960
Enzymes [BR:
goc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CXX93_02960
DNA replication proteins [BR:
goc03032
]
Prokaryotic type
DNA Topoisomerases
CXX93_02960
DNA repair and recombination proteins [BR:
goc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CXX93_02960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AUH67497
LinkDB
All DBs
Position
complement(630811..633309)
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AA seq
832 aa
AA seq
DB search
MSDETDLPENNGGDRIEPVDLGQEMQNSYIDYAMSVIVGRALPEVRDGLKPVHRRLLYAS
FDAGFRPDRGYVKSARPVSETMGNYHPHGDSSIYDALVRLAQPWSMRYPLIDGQGNFGSR
GNDGAAAMRYTEARLTPLAMEMLRDITEETVDFIPNYDGKTQEPTVLPSRVPNLLINGSG
GIAVGMATNIPPHNLREVADAVFWALENPEADEEATLAACMEAVKGPDFPTAGLIVGSQG
IRDAYMTGRGSIRMRSVVDIEEVKGTTQLVVTELPYQVNPDNLISSIAEQVNDGKLKGIS
KIEDQSSDRAGLRIVITLRRDGVARVVLNNLYKHSQLQTNFGANMLSIVDGVPRTLRLDQ
MIRLYVAHQIDVIIRRTRYRLRKAEERAHILRGLVKALDALDEVIALIRASANTEAARTG
LMDLLDIDEIQADAILAMQLRRLSALERQKIIDELAEIEREIADLKDILARPERQRAIVR
DELKEVVDKYGDDRRTRIIPAEGDVTDEDLIAREDVVVTITETGYAKRTKTDLYRSQKRG
GKGVQGAGLKQDDIVAHFFVSSTHDWLLFFTTKGRVYRAKAYELPEANRTARGQHVANLL
AFQPEERIAQVIRISGYDDAPYLVLATRNGLVKKSRLDAFDSNRSGGIAAINLRGDDELV
GARLCSADDDLLLVSKKGQSIRFTADDETLRPMGRQTSGVQGMRFNADDELLSLTVVRPD
TFLLVATSGGYAKRTDIEEYSAQGRGGKGVLTIQHDPKRGDLVGALVVDLDSEIYAITSS
GGVIRTKAKQVRKAGRQTKGVRLMNLSEGDNLIAIARNADEPDEDEGAADDN
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaaactgatctgccagagaacaacggcggggaccgcatcgagcccgtcgat
ctcgggcaggagatgcagaacagctacatcgactacgccatgagcgtgatcgtcggacgc
gccctgccggaggtccgcgacggcctcaagccggtgcaccgccggcttctgtacgcatca
ttcgacgccggtttccgtcccgaccgcggctacgtgaagtcggcccgcccggtgtcggag
acgatgggtaactaccatccgcacggcgacagctcgatctacgacgcgctggtgcgtctg
gcgcagccgtggtcgatgcggtacccgctcatcgacggtcagggcaacttcggttcgcga
ggcaacgacggcgccgccgccatgcgatacaccgaggcccgactcactccgctggccatg
gagatgctgcgcgacatcaccgaggagaccgtcgacttcatcccgaactacgacggcaag
acgcaggagccgacggtgctgccgtcgcgcgtcccgaatctgctgatcaacggttccggc
ggcatcgcggtcggtatggcgaccaacatcccgccgcacaatctgcgcgaggtcgcggac
gccgtgttctgggcgttggagaacccggaggccgacgaggaggcgacgctcgccgcctgc
atggaggccgtcaaggggccggacttcccgaccgccggactgatcgtcggcagccagggc
atccgcgatgcctacatgaccggccgcggcagcattcggatgcgctcggtggtcgacatc
gaggaggtcaagggcaccactcagctggtcgtcaccgagctcccgtaccaggtgaacccg
gacaatctgatcagttcgatcgccgagcaggtcaacgacggcaagctcaagggcatcagc
aagatcgaggatcagtcgtccgatcgtgccggcctgcgcatcgtcatcaccctgcgacgt
gacggcgtggctcgcgtggtgctcaacaacctgtacaagcacagccagctgcagaccaac
ttcggcgccaacatgctgtcgatcgtcgacggtgtgccgcgcaccctgcggctcgaccag
atgatccgcctctacgtggcgcatcagatcgacgtcatcatccggcgcacccggtaccgg
ctgcgcaaggccgaggagcgcgcacacatcctgcgcggcctggtgaaggcgctcgacgcg
ctcgacgaggtcatcgccctcatccgcgcgtcggccaacaccgaggcggcacggaccggc
ctgatggatctgctcgacatcgacgagatccaggccgatgcgattctggccatgcagctg
cgtcgactctcggctctcgagcggcagaagatcatcgacgaactcgccgagatcgagcgc
gagatcgccgacctgaaggacatcctggcccgcccggaacgccagcgcgccatcgtcagg
gacgaactcaaggaggtcgtcgacaagtacggcgacgatcgccgcacccggatcattccg
gccgagggcgatgtgaccgacgaggacctgatcgcccgcgaggacgtcgtcgtcacgatc
accgagaccgggtacgccaagcgcaccaagaccgatctctaccgcagccagaagcgcgga
ggcaagggagtccagggcgccggattgaagcaggacgacatcgtcgcccacttcttcgtc
tcgagcacccacgactggctgctgttcttcaccaccaagggtcgcgtctaccgcgccaag
gcctacgaactgccggaggccaaccgcaccgcccgcggccagcacgtcgcgaacctgctg
gccttccagccggaggagcggatcgcgcaggtgatccggatctccggctacgacgacgcg
ccgtacctggtgctcgccacccgcaacggactggtcaagaagtcgcggctggacgccttc
gattccaaccgctccggcggcatcgcggcgatcaatctacggggcgacgacgagctggtc
ggcgcgcggctgtgcagcgccgacgacgacctgctgctggtgtcgaagaagggtcagtcg
atccgcttcaccgcggacgacgagacgctgcggccgatgggacgtcagacctcgggcgtg
cagggtatgcggttcaatgccgacgatgagctgctcagcctcaccgtcgtccggcccgac
accttcctgctggtcgcgacgtcgggcggctacgccaagcggaccgacatcgaggagtat
tcggcgcagggccgcggcggcaagggcgtgctgacgatccagcacgatcccaagcgcggc
gacctggtgggtgctctcgtcgtcgatctcgacagcgagatctacgcgatcacctccagc
ggaggcgtgatccggaccaaggccaagcaggtccgaaaggccggcaggcagaccaagggc
gtgcgcctgatgaatctgtccgagggcgacaacctcatcgcgatcgcgcgcaatgcggac
gagcccgatgaggacgagggcgcggcagacgacaactag
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