Gordonia sp. YC-JH1: CXX93_04885
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Entry
CXX93_04885 CDS
T05256
Name
(GenBank) DUF1998 domain-containing protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
CXX93_04885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
DUF5615
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AUH67794
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Position
complement(1044155..1046467)
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AA seq
770 aa
AA seq
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MSQRGYGSELLGRTLEGTPEGTAGLTHMSVIDPRGGEFTDWPDWVHPAVREAFVERGVQR
PWRHQSEAASLAAGGRHVCVCTGTASGKSLAYQLPVLTTFADDPDSTALYLSPTKALGTD
QLRSVAQLIAGRPEFAHLQPCAYDGDTDSELRQWARQHSRWIFTNPDMLQIGITSTHPRW
RPFFAKLRYIVVDECHHYRGVFGSHTALVLQRALRIARKYGADPVVIGASATVSNPAQAL
SRLIGEDVVAVTEDASPHGERTVAMWEPGFLEEVTGENEAPVRRSAGSEAARLLADFVIE
GARTLCFVRSRRGVEVTAVRARQILAEAAPELVDRVAAYRAGYLADDRRRLERAISEGEL
LGVATTNALELGVDISGLDAVVVAGYPGTVASFWQQAGRAGRRGEGSIVVMVARDDPLDT
YLVHHPEALLERAVEATVTDPTNPFVLGPHMLCAATEFPLTEAEVAAFSAEQVVADLAAE
GKLKRRKAGWYAAPGLDPHGDIDLRGGIGGQVLIVDVTSSRLLGTVDTARAMTSVYPGAV
YLHQGESFVVDELDLDDGLALSHPEEPDWTTSAREVSDVSILETVDRREFGPLTVALASV
VVTSQVVGFLRKSLSGEILDSVPLDLPEHRLETRAVMYTLTPEAMIDAGIALDKFPGALH
AAEHAAIGMLGLVATCDRWDIGGLSTALHPGTGLPTVFVYDGFPGGAGFADRGYEAFTEW
VAATEAAVSSCGCDTGCPSCVQSPKCGNGNEPLDKEHAIKLLRLIGRLHT
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcgaggttacggcagcgaacttctcggccgcaccctcgagggaacgccggag
ggcaccgcgggcctcacgcacatgtcggtgatcgatccccgcggcggggagttcaccgat
tggcccgactgggtgcacccggcggtgcgcgaggcgttcgtcgaacgcggagtgcagcgt
ccctggcgtcaccagtccgaggccgcgagcctcgccgccggcggtcgtcacgtctgtgtc
tgcaccggcaccgcatcgggaaagtccctcgcctaccagctcccggtgctcaccaccttc
gccgacgaccccgactcgacggcgctctacctgtccccgaccaaggctctcgggaccgac
cagctccggtcggtggcgcagttgatcgccggccggccggagttcgcgcacctgcagccg
tgcgcttacgacggcgacaccgattcggagctgcgtcagtgggcgcggcagcattcccgg
tggatcttcacaaatcccgacatgctgcagatcggcatcacctccacccatccccgatgg
cggccgttcttcgcgaagctccgctacatcgtcgtcgacgaatgccaccactaccgcggc
gtcttcggctcgcacaccgcgctggtgctgcagcgggcactgcggatcgcgcggaagtac
ggcgccgaccccgtcgtgatcggggccagcgcgaccgtgtcgaacccggcgcaggccctg
tctcggctgatcggcgaggacgtcgtcgccgtcaccgaggacgcctcgccccacggtgaa
cggaccgtcgccatgtgggagccgggtttcctcgaagaggtcaccggggagaacgaggct
ccggtacgccgctccgcaggatcggaggcggcacgactgctcgccgacttcgtcatcgaa
ggcgcacgcaccctgtgcttcgtacgcagccggagaggcgtcgaggtgaccgcggtgcgg
gcccggcagatcctggccgaggcggcaccggagttggtcgaccgcgtcgccgcgtaccgc
gccggatacctcgccgacgatcggcgccggctcgaacgggccatctccgaaggcgaattg
ctcggtgtcgcgaccaccaacgccctcgaactcggcgtcgacatctccgggctcgacgcc
gtggtggtggcaggctaccccggaacggtcgcctccttctggcagcaggccggacgcgcc
ggtcggcggggcgaggggtcgatcgtcgtgatggtggcccgcgacgatccgctcgacacc
tatctggtgcaccaccccgaggcgctcctggagcgcgcggtggaggccaccgtcaccgac
cccaccaacccgttcgtcctcggtccgcacatgctgtgcgcggcgaccgagttcccgctc
accgaggccgaagtcgcggccttctccgccgagcaggtggtggccgacctcgccgccgag
ggcaagctcaaacgacgcaaggccggctggtacgcggcacccgggctcgacccgcacggc
gacatcgacctgcgcggcggcatcggcggacaggtgctgatcgtcgatgtcacgtcctcc
cgtctgctcggcaccgtcgacaccgcccgcgccatgacttcggtgtacccgggagcggtg
tacctgcaccagggcgagagcttcgtggtcgacgaactcgatctcgacgacggcctcgca
ctgagtcaccccgaagaacccgattggacgacgtcggctcgcgaggtcagcgacgtgtcg
atcctcgagaccgtggaccgccgcgagttcggtcccctcaccgtcgctctcgcatcggtc
gtcgtcaccagtcaggtggtcggtttccttcgcaagtcgctcagcggcgagatcctcgac
tcggttccgctcgacctgccggagcaccgactcgagacccgcgccgtgatgtacaccctc
acgcccgaggcgatgatcgacgccggcatcgcactcgacaagttccccggcgcactgcat
gccgccgagcacgcggccatcggaatgctggggctcgtcgcaacgtgcgaccgctgggac
atcggcggactctccaccgcgctgcatccgggaaccggcttgccgaccgtgttcgtctac
gacggtttccccggcggggcgggcttcgccgatcgcgggtacgaggcgttcaccgagtgg
gtcgcagccaccgaggccgccgtctcctcatgcggctgcgacaccggctgcccgtcgtgc
gtgcagtccccgaagtgcggcaacggcaacgaaccgctggacaaggagcacgcgatcaaa
ctgctccgcctgatcggccgtctgcacacgtag
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