Gordonia sp. YC-JH1: CXX93_05065
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Entry
CXX93_05065 CDS
T05256
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00730
Thiamine metabolism
goc01100
Metabolic pathways
goc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CXX93_05065
Enzymes [BR:
goc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CXX93_05065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AUH70137
LinkDB
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Position
complement(1087371..1089062)
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AA seq
563 aa
AA seq
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MGTSMPGTTRDDATAEVTCGPIEGSSKVYLDVDGMAVPQRRVHLTNGEHLDLYDTSGPYT
DSSATIDLEKGLAKTRDSWERPAPVPVGGHDAATQLAWARAGIVTPEMRYIAAREGVDAE
LVRSEVAAGRAVIPVNHRHPESEPMIIGKAFAVKVNANIGNSAVTSSIAEEVEKMVWATR
WGADTIMDLSTGKDIHLTREWILRNSPVPVGTVPIYQALEKVNGDPTRLTWEIYRDTVIE
QAEQGVDYMTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHTESFLYTHFDELCE
IFARYDITFSLGDGLRPGSIADANDEAQFAELRTLGELTKIAKSHGVQVMIEGPGHVPMH
KIAENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEH
LGLPNRDDVKVGVITYKIAAHSADLAKGHPRAQERDDALSRARFEFRWTDQFNLALDPDT
AREYHDETMPAEPAKTAHFCSMCGPKFCSMRISADVRTYAQENGLVTQEDIDARLAQDMA
AKSAEFAAAGNQVYLPISEAAAP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggcacatccatgcctggaaccacacgtgacgacgccaccgccgaggtgacctgcggc
cccatcgagggcagcagcaaggtctacctcgacgtcgacggcatggccgttccccagcgt
cgagtgcatctgacgaacggcgagcacctcgacctctacgacacctccggtccgtacacc
gactcgtcggcgaccatcgacctcgagaaggggctggcgaagacgcgcgactcctgggaa
cggccggcaccggtgcccgtgggcggacacgacgcggccacccagctggcctgggcacgc
gccgggatcgtgacgccggagatgagatacatcgccgcgcgcgagggcgtcgacgccgag
ctggtccgcagcgaagtggccgccggacgcgcggtgattccggtcaatcaccgccacccc
gagtcggagccgatgatcatcggcaaggccttcgcggtgaaggtgaacgcgaacatcggc
aactctgccgtcacctcgtccatcgccgaagaggtggagaagatggtctgggccacccgg
tggggcgccgacaccatcatggatctctcgaccggcaaggacatccacctcactcgcgaa
tggatcctgcgcaactcccccgtcccggtcggaaccgtgccgatctaccaggcgctcgag
aaggtgaacggcgatcccacgcgcctgacctgggagatctaccgcgacaccgtaatcgaa
caggccgaacagggcgtcgactacatgaccgtgcacgccggcgtgctcctgcgttacgtc
ccgctgaccgccaagcgggtgaccggcatcgtctcgcgcggcggctccatcatggccgca
tggtgtctggcccaccacaccgagtcgttcctgtacacgcacttcgacgagctgtgcgag
atcttcgcgcggtacgacatcaccttctcgctcggcgacggcctgcgccccgggtccatc
gccgatgcgaacgacgaggcgcagttcgccgaactgcggaccctgggcgagctgacgaag
atcgccaagagccacggcgtacaggtgatgatcgagggccccgggcacgtcccgatgcac
aagatcgccgagaacgtccggctcgaggaagagctgtgtgaggaggcccccttctacacg
ctcggcccgctcgccaccgacatcgcgccggcctacgaccacatcacctccgcgatcggc
gctgcgatgatcgcgcaggccggcacggcgatgctctgctacgtgacgccgaaggagcac
ctggggctgccgaaccgggacgacgtgaaggtcggcgtcatcacctacaagatcgcggca
cactcggccgacctcgccaaggggcatccgcgcgcccaggaacgcgacgacgccctcagc
agggcgcgcttcgagttccgctggaccgatcagttcaacctcgcgctcgatcccgacacg
gcacgcgagtaccacgatgagacgatgcccgccgagccggcgaagaccgcgcacttctgc
tccatgtgcggccccaagttctgctccatgcggatctcggccgacgtccgcacctatgca
caggagaacgggctcgtcacgcaggaggacatcgacgcgcggctggcacaggacatggcg
gccaaatcggccgagttcgcggcggcgggaaaccaggtgtacctgccgatctccgaggcc
gccgcgccgtga
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