Gordonia sp. YC-JH1: CXX93_07395
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Entry
CXX93_07395 CDS
T05256
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CXX93_07395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
goc03021
]
CXX93_07395
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_07395
Enzymes [BR:
goc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CXX93_07395
Transcription machinery [BR:
goc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CXX93_07395
DNA repair and recombination proteins [BR:
goc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CXX93_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AUH68211
LinkDB
All DBs
Position
1616490..1617542
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVIAENRSKFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTNIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSMTARDALASAGKTLVELFGLARELNVEAEGIEIGPSPQE
ADHIAAFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPSQVAGYDPATGTWSDDASFGDDGGEDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccactctgtccgaagaggtcatcgccgagaaccgctcgaag
ttcaccatcgaacccctcgagccgggcttcggctacaccttgggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgttcccggcgtgaaggaggatgtcaccaacatcatcctgaacctc
aagggactggtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgtaagcag
ggcccgggcaccgtgaccggtgcggacatcgttccgcccgccggcgtcaccgtgcacaac
ccggacctgcacatcgcgaccctcaacgacaagggcaagctcgagatcgagctggtcgtc
gagcggggccgcggttacgtgccggccgtgcagaacaaggccaccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctgaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctggtgctcgacgtggagaccaagaac
tccatgaccgcgcgtgacgccctggcgtcggccggcaagaccctggtcgagctcttcggc
ctggctcgggagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgcaggag
gcggatcacatcgccgcgttcagcctgccgatcgaggatctcgagctgaccgtccgttcg
tacaactgcctcaagcgcgagggtgtccacaccgtcggcgagctggttgcgcgcaccgag
tcggatctgctcgacatccgtaacttcggccagaagtcgatcgacgaggtcaaggtgaag
ctgcacagcctgggtctggccctcaaggacagcccggcgagcttcgacccgtcgcaggtc
gccggctacgacccggccaccggcacctggtccgatgatgcgtcgttcggcgacgacggt
ggcgaggattacgccgagaccgagcagctgtag
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