Gordonia sp. YC-JH1: CXX93_07740
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Entry
CXX93_07740 CDS
T05256
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03420
Nucleotide excision repair
goc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CXX93_07740
03430 Mismatch repair
CXX93_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_07740
Enzymes [BR:
goc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXX93_07740
DNA repair and recombination proteins [BR:
goc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CXX93_07740
MMR (mismatch excision repair)
Other MMR factors
CXX93_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUH68266
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All DBs
Position
1686769..1688817
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AA seq
682 aa
AA seq
DB search
MTVIGHPAAEGGVTSGLDPEQLEAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVDSGQVN
PEQVLAVTFTARAAAEMRERLESLGVAGPGNRIAAQTFHAAAMRQLRYFWPMAMGDMRWE
LLEHKFRMVGRVSRELGLDVADRDLLRDLASEIEWAKSSGLGPGQYAEAARRTHRDLPAD
PATVAQVFSAYEAAKVAPNGDRLLDFEDLLTFTTTILRSDPSIAEEFRSRYRSFVVDEYQ
DVTPIQQDLLDAWLGGRDDLTVVGDANQTIYSFTGATPTYLLDFTRRYPEATLVRLQRDY
RSTPEVVSLANAVIGKARGRIAGTRLKLVGQRPSGPEPVFAGFDDEIAEVVGVVAKIRSL
IRTGVPASEIAVLYRVNAQSEAYEEALSEAGIDYQVRGAQSFFERPEIVAGMRRLTSLAA
GAAPPPMAPVDAVRHALHSVGLTESEPKGANARARWQQLLRLMEIVESIAGESPELDFAG
LVARLEERSRMRHAPVGAGVTLSSMHAAKGLEWDAVFLTGLHEGSMPLGRASKTTEEVEE
ERRLFYVGVTRAREHLHLSWSLSRGEGRGAKRRRSRFLEALVPNPAADLDPLPERRDPDP
DVLAALTAWRKDFAESEGISAVNVMSVSMIRSIATAVPTSIDELAKVRGFGAERADVIGA
RILDVIDAALPGRRRGETAGRK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgatcgggcatccagcggcggaaggcggagtcacctcaggccttgatccagaa
cagctcgaagcggttctcgcgccccgaggacccgtctgcgtgctcgccggcgcgggtacc
ggcaagacgcgcaccatcacccggcggatagcgcatctggtcgactccgggcaggtgaac
cccgagcaggtgctggccgtcacgttcaccgcgcgagcggccgcggagatgagggaacgg
ctggagtcgctcggcgtcgccggacccggcaaccggatcgccgcccagaccttccacgcc
gccgccatgcgccagctccgctacttctggccgatggcgatgggcgacatgcgctgggaa
ctgctggagcacaagttccggatggtcggtagagtctcgcgcgaattgggcctcgacgtc
gccgaccgcgatctgctgcgggatctggcgtcggagatcgaatgggcgaagtcgtcgggt
ctgggtccggggcagtatgcggaggcggcgcgacgcacccaccgcgaccttccggccgac
cctgcgacggtcgcgcaggtgttctccgcgtatgaggcggccaaagtcgcgccgaacggc
gaccgactgctcgatttcgaggatctgctcaccttcaccaccacgatcctgcggtcggac
ccgtcgatcgccgaagagttccggtcccgctaccgcagcttcgtggtggacgaataccag
gacgtcactcccatccagcaagacctgctcgacgcatggctcggcggacgcgacgacctc
accgtcgtcggcgacgcgaatcagaccatctacagtttcaccggcgcgacgccgacgtac
ctgctcgacttcacccgccggtacccggaggccacgctggtgcgactgcagcgcgactac
cgctccactccggaggtggtgagtctggcgaacgcggtcatcggcaaggcccgcggccgc
atcgcgggcacgcggctcaaactcgtgggccaacggccgtcgggaccggaaccggtcttc
gccggattcgacgacgagatcgccgaagtggtcggagtggtggcgaagatccggtcgttg
atccgcaccggtgtcccggcctcggagatcgcggtgctctaccgggtcaacgctcagtcc
gaggcctacgaggaggcgctgtcggaggcggggatcgactaccaggtccgcggcgcgcag
agcttcttcgagcggcccgagatcgtggcggggatgcggcgcctgacgtctctggcggcg
ggggccgcacccccgccgatggcgccggtggacgccgtgcggcatgcgctgcactccgtc
gggctcaccgagtccgagccgaagggcgccaacgcgcgtgcgcgatggcaacagctgctg
cgtctgatggagatcgtggagtcgatcgccggggagtcaccagaactggacttcgccgga
ctggtggcaaggctcgaagagcggtcgcggatgcgacacgcgccggtcggtgcgggcgtc
acgctgtcgtcgatgcacgcggccaagggcctcgaatgggatgcggtgttcctgaccgga
ctgcatgagggatcgatgccgctcgggcgtgcgtccaagaccaccgaagaagtcgaagag
gagcgcaggctcttctatgtgggtgtcacgcgggcacgtgaacacctgcacctgtcgtgg
agtctttcgagaggggaggggcggggcgccaagcgtcgtcgttcccgattcctcgaggca
ctggtgccgaatccggccgccgacctcgatccgctgcccgagcgccgcgaccccgatccc
gacgtcctcgccgcgctgaccgcctggcgcaaggacttcgccgagtccgagggcatctcg
gcggtcaacgtgatgagcgtgtcgatgatccgctcgatcgccactgcggtgccgacttcg
atcgacgagctggcgaaggtgcgcggcttcggagcggagcgggcagacgtgatcggggcg
cggatccttgacgtgatcgatgccgccctccccgggcgccgacgcggcgaaaccgcaggt
agaaaataa
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