Gordonia sp. YC-JH1: CXX93_08235
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Entry
CXX93_08235 CDS
T05256
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00450
Selenocompound metabolism
goc00970
Aminoacyl-tRNA biosynthesis
goc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CXX93_08235
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CXX93_08235
Enzymes [BR:
goc01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CXX93_08235
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
Cys_Met_Meta_PP
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AUH68344
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Position
1786840..1788156
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AA seq
438 aa
AA seq
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MNQVAPQHDPRRLIPRTDALLALPEVAAARRRLSADTVVERVRAIQERARRGELPPQEVA
AAVIADLTRARASAQTPVLNATGVVVHTNLGRAPLSRAAVSAMVDAAGYVDVELDLESGV
RGKRGARTRSALLAACPAAGDALAVNNGAAALVLATTALAAGREVVVSRGELIEIGAGFR
LPDLIASTGARLREVGTTNRTHLSDYADAIGPDTGCLLKVHPSNFTVSGFTSAAPVSELA
QVARDRGVPLVVDVGSGLLAPDRTLPDEPDAATMLNDGADLVTASGDKLLGGPQAGLVLG
RADLVQRLSRHPLARAVRIDKLALAALEATVAGPTAPVVEYLHADPERLRARAQALAAAV
DGTVVEHDGRVGGGGAPGVPLPGYAVRLPESIAARLRTGTPSVLPRVHDGFTLIDLRCVP
EADDSRLAEAVRAAMRAD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaggttgcgccgcagcacgacccgcgcagattgattccgcgcacggatgctctg
ctggcgttgccggaggtagcggcggctcgtcggcgcctgtcggcggacacagtcgtcgag
cgtgtccgcgcgatacaggagagggcacgccgaggtgagttgccgccgcaggaggtggct
gccgcggtgatcgccgacctcacccgagcgcgggcttcggcgcagacgccggtactcaac
gccaccggcgtcgtggtccacaccaatctcgggcgcgccccgctcagccgggccgcggtg
tcggcgatggtcgatgccgccggctacgtcgatgtggaactggacctggaatcgggggtc
cgcggcaagcggggcgctcggacccgctccgcgttgctcgccgcgtgcccggcggccggt
gacgcactggcggtgaacaacggcgcggcggcactggtgctcgcgaccacggcgctggcc
gccggccgtgaagtcgtcgtctcccgcggtgaactgatcgagatcggagccgggttccgg
ctgcccgacctgatcgcgtcgaccggggcccggctccgcgaagtcggcaccaccaatcgc
acgcatctctccgactacgccgacgcgatcggtccggataccgggtgtctgctcaaggtt
caccccagcaacttcacggtgtccggattcacctcggccgcgccggtgagcgagctggcg
caggtggcgcgggaccggggcgtgccgctcgtcgtggacgtcggctccggactgctggcg
ccggatcggacattgcccgacgaaccggatgcggcgacgatgctgaacgacggtgcggat
ctggtgaccgcgagcggcgacaaactgctcggcgggccgcaggccggactggtcctgggg
cgggcagatctggtgcagcggctgtcgcggcacccgctggcgcgtgcggtgcggatcgac
aagctggcgttggccgcgctcgaagcgacggtcgccggacccaccgcgccggtggtcgaa
tacctgcacgccgacccggagcgtctgcgggcgcgagcgcaggcgctggcggcggccgtg
gacgggaccgtcgtcgagcacgacggccgcgtgggcggcggcggtgctccgggagttccg
ctgcccggctatgcggtccggctgccggagtcgatagccgcgcggctgcggaccgggacg
ccgtcggtgctgccgcgcgtgcacgacgggttcacactgatcgacctgcgctgcgttccg
gaggcggacgactcgcggctcgccgaggccgtccgcgccgccatgcgggcggactga
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