Gordonia sp. YC-JH1: CXX93_08445
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Entry
CXX93_08445 CDS
T05256
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00300
Lysine biosynthesis
goc01100
Metabolic pathways
goc01120
Microbial metabolism in diverse environments
goc01230
Biosynthesis of amino acids
Module
goc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CXX93_08445
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
goc01002
]
CXX93_08445
Enzymes [BR:
goc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
CXX93_08445
Peptidases and inhibitors [BR:
goc01002
]
Metallo peptidases
Family M20
CXX93_08445
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AUH68375
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All DBs
Position
1834664..1835770
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AA seq
368 aa
AA seq
DB search
MSTSRLDLTADPIELTAALVDVPSVSRDESEIADAVEAALRAQTDGFEVVRHGNCVLARS
HRGKPTRVILAGHLDTVPIVDNVPSRRTVTDEEGEVLHGCGTVDMKSGDAVFLHLAATLE
DPAHDLTLIFYDCEEIAAEFNGLGTIERELPDWLEGDAAILGEPTAGQIEAGCQGTLRVR
FTASGTRAHSARVWMGDNAIHKLGRMLTTLGAYEPRRVDIDGCEYREGLSAVGIHGGVAG
NVIPDEAYVDVNFRFAPDRSPEQAFDHVREVFAADLADGTLTATVTDSAAGALPGLSHPA
AAKLVEAAGGRFRAKYGWTDVSRFAALGIPAVNLGPGDPSLAHRVDERVPVVQITEVAEI
LRTYLTAD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacttcgaggctggacctgaccgccgatcccatcgaactgaccgccgcgttggtc
gacgtccccagtgtgagccgcgacgaatcggagatcgccgacgcggtggaggccgctctc
cgcgcgcagaccgacggcttcgaggtggtccgccacggcaactgcgtcctcgcgcggtcg
catcgaggcaagccgacgcgggtgatcctcgccggtcatctcgacaccgtgccgatcgtc
gacaacgtcccctcgcggcggaccgtcaccgacgaggagggcgaggtgctgcacggctgc
gggacggtggacatgaaatcgggagacgcggtgttcctccacctggccgcgaccctcgag
gaccccgcgcacgatctgacgctgatcttctacgactgcgaagagatcgccgcggagttc
aacggactggggaccatcgagcgcgaactgcctgactggctcgagggcgacgcggcgatt
ctcggcgaaccgacagcgggccagatcgaggcgggatgccaggggacgctccgcgtccga
ttcaccgcaagcggaacgcgcgcacattctgcgcgagtctggatgggcgacaatgcgatt
cacaaactcggccggatgctgacgaccctcggggcgtatgaaccgcggcgcgtcgacatc
gacggctgcgaataccgggaaggactgtcggcagtcgggattcacgggggcgtcgcggga
aatgtgattcccgacgaggcctacgtcgatgtgaatttccgcttcgcccccgaccgttca
ccggagcaggccttcgaccacgtccgggaggtcttcgccgcggacctcgccgacgggacg
ctgacggcgacggtgaccgactcggccgcgggggcgctcccggggctgtctcatccggcc
gccgccaagctggtggaggccgcgggcggacgcttccgggcgaagtacgggtggacggac
gtgtcgcggttcgcggccctgggcatccccgcggtgaacctgggtccgggtgacccgagc
ctggcgcaccgcgtggacgagcgcgttccggtagtgcagatcaccgaggtcgctgagatc
ctgcgcacctatctcaccgccgactga
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