Gordonia sp. YC-JH1: CXX93_09715
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Entry
CXX93_09715 CDS
T05256
Name
(GenBank) helicase
Organism
goc
Gordonia sp. YC-JH1
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
AUH70245
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Position
complement(2076706..2080077)
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AA seq
1123 aa
AA seq
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MTSPDWTDEQVDAVLGAFDTRTLQRARSYATNGMITGIDWSDGVLTGVSLGSGEQRYRCK
VTAVWEGPKPRVSASCTCPVAIRCKHCAALVMAATAEGTAVARRSSSAQSALPLSRWRTL
IDEISKSSQSVEHTPDGPELPLALQFSVHRSYRDADSVRLRPLTMSEQGRWVKTRVTWKT
ILSGKTADRHPEKALDVLTRLASALAISGQSASIGDEMSLLMAPPSIWVLLDEARDAGVE
FVNARSSKSTTVEYGDHLSTRLHVTAQRAGVHVALEVLVDGRPVPPDAFQFPIGRPRAHG
IAQEVGDVLYIGPLRRLTTTESMLLVSRVPLEVSDDELGDFREALPTLQADRAVVVEPGA
FPAADLAGPFPVLRIETGEHPCATWSTAYETDGEVHEFPAQGTETGRFRNAAAERAMWDE
VRPELEMVARSSAHWVAAAADLLERRLPKYRSDYRRFNRVYAVLRQLRGGCTVAAAFDSL
PDFRTVPVPLSQLEVAILCAETVPKITELGRVRVDVVGTPPDYRPAEAPPVLSFSGDGDA
RSDWFDLRVALDVDGHKIPITTIISALASGETHMVLDDGTYFALDIPALQTLRDRLDEAR
EMGELDDDRVSTHTLNASLWDELLELGVVDEQLRRWRERITRLAAARPPHSVPPPAGLDA
RLRPYQQEGLDWLTFLWDNELGGVLADDMGLGKTVQTLALIQRVVDERPDARFLVVAPTS
VIANWAAEIHRFVPGLEMLTVPATEKRVGTPLADRIADARIVVTSYALLRIDYDAFARVP
WTGAIFDEAQFLKNHNSKTYQAARRLQAPFKLAITGTPMENRVMELWSLVSVVAPGLYSS
PKLFKEHFADAIESGQAPERLAILRRRLRPIMLRRTKDQVLVDLPEKQEQLLPIELEPKH
RKVYDTYLARDRQQLLGLLEDFDGNRIQVLRALTRLRQLSLHPALVDDEHAAVNSAKIEY
LSEQLPILIDEGHSALVFSSFTGFLKLIAARLDAAGIAYSYLDGSTAITRRGEQIEQFTH
GRTRVFLISLKAGGFGLNLTAADYCFMTDPWWNPAAENQAVDRAHRIGQHRAVTVYRMVS
TGTIEEKVIDLQNRKRELFDALLDDGAAFSGAITAEDVRGLLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccgactggaccgacgagcaggtcgacgccgtcctcggcgccttcgacact
cggacgctgcagcgtgcgcggtcgtacgccaccaacggcatgatcaccggtatcgactgg
tccgacggcgtcctcaccggcgtctcactcggctccggtgagcagcgctaccggtgcaag
gtcaccgccgtctgggagggcccgaagccgcgggtgtccgcgagctgcacctgcccggtc
gcgatccgctgcaagcattgcgcggcgctggtcatggccgcgaccgccgaaggcacggcc
gtcgcccggcgatcgtcgtcggcgcagtcggccctcccgctctcacgatggcgcactctg
atcgacgagatctcgaagtcgtcgcagtccgtcgagcacaccccggacggtccggaactg
ccactggcacttcagttctccgtacaccgcagctatcgcgacgccgactccgtccgtctc
cggccgctcaccatgagcgagcaggggcggtgggtcaagacgcgcgtcacctggaagacg
atcctgtccggaaagaccgccgaccgccatccggagaaggccctcgacgtcctgacccga
ttggcctcggcgctggcgatcagcggacagagcgcctccatcggtgacgagatgtcgctg
ctgatggctccgccgagcatctgggtcctgctcgacgaggcccgcgacgcgggcgtggag
ttcgtcaacgcgcggtcgtcgaagagcacgaccgtcgagtacggcgatcacctcagcacc
cgactgcacgtcaccgctcagcgtgccggcgtccatgtggcgctcgaggtgctggtggac
ggtcggcccgttccgccggacgccttccagttcccgatcggcaggccccgcgcgcacggc
atcgcgcaggaggtgggcgacgtcctgtacatcggcccgctgcgcaggctgaccaccacc
gaatcgatgctgctggttagccgggtcccactggaagtgagcgacgacgaactcggcgac
ttccgcgaggcgctgccgaccctgcaggccgaccgcgccgtggtggtggaacccggagcg
ttcccggccgccgacctcgccggtccgttcccggtactgcgcatcgagaccggtgagcac
ccgtgcgccacctggtcgacggcgtacgagaccgacggcgaggtccacgagttcccggcg
cagggcaccgagaccggccggttccgcaacgcggcggccgagcgcgcgatgtgggacgag
gtgcgtcccgagctggagatggtcgcccgcagcagcgcccactgggtggcagccgccgcc
gatctcctcgaacgtcggctgccgaagtaccgctccgactaccgtcgcttcaatcgggtg
tacgccgtcctgcgtcagctccgcggcggctgcacggtcgcggcggcgttcgattctctt
cccgacttccgcaccgttccggtgccgctgtcacagctcgaagtggcgatcctgtgcgcg
gagacggtcccgaagatcaccgagctcggccgggtgcgcgtcgacgtggtcggcacgccg
cccgactaccgtcctgccgaggcgccgccggtcctgagcttctccggcgacggcgacgcg
cgcagcgactggttcgacctccgcgtggcactcgacgtggacggccacaagattccgatc
accacgatcatctccgccctcgcgtccggcgagacgcacatggtgctcgacgacggtacg
tacttcgccctcgacatccccgcgctgcagaccctgcgcgaccggctcgacgaggcccgg
gagatgggcgagctcgacgacgaccgcgtcagcacgcacaccctcaacgcatcactgtgg
gacgaactgctcgaactcggcgtggtcgacgagcagctccgccgatggcgtgaacgcatc
acccgtctggccgcggccaggccgccgcactcggtaccgccgcccgcgggtctcgacgcc
cggctgcggccgtaccagcaggagggcctggattggctcacgttcctctgggacaacgag
ctcggcggcgtgctcgccgacgacatggggctcggcaagacggtgcagactctcgcgctg
atccagcgcgtagtggacgagcgacccgacgcccggttcctggtggtcgcgcccaccagc
gtgatcgccaactgggccgccgagatccaccggttcgtacccggcctcgagatgctgacc
gttcccgccaccgagaagcgggtcgggacgccgctggccgatcggatcgccgacgcccgg
atcgtcgtcacctcctacgcgttgctgcggatcgactacgacgccttcgcccgggtgccg
tggacgggtgcgatcttcgatgaggcgcagttcctcaagaaccacaactccaagacctac
caggccgcacggcggctgcaggccccgttcaagctcgcgatcaccggaaccccgatggag
aaccgcgtgatggaactgtggtcgctggtgtcggtggtggcgccgggactctacagttca
ccgaaactgttcaaggagcacttcgccgacgccatcgaaagcgggcaggctcccgagcgg
ctggcgattctccgacgccggctgcggccgatcatgttgcgccgcaccaaggatcaagtg
ctcgtcgacctgcccgagaagcaggaacagttgctgccgatcgagctcgagcccaagcat
cgaaaggtgtacgacacctatctggcccgcgaccgccagcaactcctcgggctcctggag
gacttcgacggcaaccgcatccaggtgctgcgtgcgctcacgcggctacggcagttgagt
ctgcatccggcgctggtggacgacgagcacgccgcggtgaactcggcgaagatcgagtac
ctgtccgagcagctcccgatcctcatcgacgagggccacagtgcgttggtcttcagcagc
ttcaccggcttcctgaaactgatcgccgcccggctcgacgcggccgggatcgcctacagc
tatctggacggctccaccgcgatcacccggcgcggcgagcagatcgagcagttcacccac
ggccgcacccgggtgttcctcatcagcttgaaggccggcggcttcggattgaacctcacc
gccgccgactactgcttcatgaccgatccctggtggaatcccgccgccgagaatcaggcc
gtcgaccgcgcgcaccgcatcggccagcaccgcgcggtgaccgtctatcgaatggtgtcc
accggcactatcgaggagaaggtgatcgacctgcagaaccgcaaacgcgaactgttcgac
gcgctgctcgacgacggcgccgcgttctccggcgcaatcaccgccgaggacgtccgcggt
ctgctcggatag
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