Gordonia sp. YC-JH1: CXX93_12290
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Entry
CXX93_12290 CDS
T05256
Name
(GenBank) arabinosyltransferase
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
CXX93_12290
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
goc01003
]
CXX93_12290
Glycosyltransferases [BR:
goc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CXX93_12290
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
DUF3185
MUCL1
Motif
Other DBs
NCBI-ProteinID:
AUH68982
LinkDB
All DBs
Position
2635569..2638901
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AA seq
1110 aa
AA seq
DB search
MSDRTPSPRTVRIARIVAVVAGAIGILLALASPFLPVTYAKTEITWPQATSSTSAPTVAN
IAAPNVSYNPVSMDATVPCSLASLLPADGGVLLSTVPKSGVDARKVGLFISATHDNLLVT
QRNAVLMTIPREQAQRTPECRIVVHADTAGTRGDVEGLTVPDSAFDIRDPNARPQIIGVY
TDLPATAPTAGLSFRSTVDTRFSTSPTPLKRTLLIVGVVATILSLIALAVLDARDGRRLR
RLLPRRWWRPTVLDGFVTAVLLIWLMIGGNTADDGYQVTVGRVAPGAGYLDNYYRYFGVP
QDPFGWHYQYLAKWMEVSTAIPWLRLLPFLFAIVGWFLISRVAIPRLGRTIAGSGVARWA
AALAFLAVWLPFNNGLRVEPVITVGILLTWVLVERAIATGRLLPFGLAIVSAAFTLTIHP
VGAVAAVALLAGLRPMLKRVLYRRRRDGLAPMLVPLVAAGLAVLYEIFADQPLATIVEGV
QAQGIVGPTNHWWTEAMRYYILLNPTPDGSIARRVGIFVTILSVLLVVLVLVRKHSVPGV
ATAALWRLVAVTGGAVAVLAFVPTKATHQMGIFACLAGPLAAAATAFLKPSVLRRPCNRT
FFAAASAYALAVAFAGRNQWWYVGSYGIPWSDDTPHIAGIGFFWPIFAVAVLLTAVGLWQ
YYRDDGRAQFADAAEPFRRPEPSRMADLPMYSLVIVSAVILAFNMISFGKAARTQSDSWT
WASSNIASLQGRPCALADAVLVEADPNTGLLAPAQLAGQRPASAGQALAGGATPPAGFSP
DGVPTHLETDDSDTSSSDTDAHPAQAVDQDQSGQSTTGDSTTADTTSDTSGGTTVSRGVN
GSSVKLPFGLDPQRVPVLGSFGAPAGTGRLTSDWYQLPERSDDRPLITLSAAGAVESIDE
LAVRHPGQQLRLEAGRVQPDGTVATVASLTPYDAGGAPQWRNLRFPMAEIPPGASVVRIV
AEDTSPGYDAWLAVTPPRATRLQTLNSLVGSDDPVLLDWEVAFAFPCQRPAGVVHGILET
PKWRITPDAVGERVNSAQWMAGDYGGPLGITENELRQTEVPAYLENDWGRDWGSLQRFTP
LLPQHDAELTVTHEDHTGLWTPGPMRVIRN
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcggacaccgagcccccggacggtccgcatcgcacggatcgtcgccgtcgtg
gccggcgccatcggcatcctgctcgccctcgcgtcgccgttcctgccggtcacgtacgcc
aagaccgagatcacctggccgcaagccacgtcgtcgacgtcggcgccgaccgtggcgaac
atcgcggcgcccaacgtctcgtacaaccccgtgtcgatggatgcgaccgtgccctgctcg
ctggcatcgctgctgccggccgacggcggcgtgctgctctcgaccgtgccgaaatccggt
gtcgacgcgcgcaaggtgggcctgttcatcagcgccacccacgacaacctcctggtcacc
cagcgcaacgccgtgctgatgacgatcccgcgcgagcaggcgcagcgcactcctgaatgc
cgcatcgtcgtgcacgccgacaccgccggcacccgcggcgacgtcgagggactgacggtc
cccgactcggccttcgacatccgcgatccgaacgcgcggccgcagatcatcggcgtgtac
accgacctgccggccaccgcccccaccgccgggctgagcttccgctccaccgtcgacacc
cggttcagcaccagccccaccccgctcaaacgcaccctgctgatcgtcggcgtggtcgcg
acgatcctgtctctcatcgcgctcgccgtgctcgatgcccgggacgggcgacgcctgcgc
cgactgctgcctcggcgctggtggcgaccgaccgtgctcgacggattcgtcaccgcggtg
ctgctgatctggctgatgatcggcggcaacaccgccgacgacggctatcaggtgactgtc
gggcgcgtggcgcccggcgcgggttacctcgacaactattaccggtacttcggtgtcccc
caagacccgttcggctggcattaccagtacctggccaaatggatggaggtcagcaccgcg
atcccgtggctgcgcctgctgccgttcctgttcgcgatcgtcggatggttcctgatcagc
cgcgtggcgatcccgcgcctgggtcggacgatcgccggttccggtgtcgcacgctgggcc
gcggccctggccttcctcgccgtgtggctgccgttcaacaacggcctgcgcgtggaaccg
gtgatcaccgtcggcatcctgctgacctgggtgctcgtcgaacgcgcgatcgccaccggc
cgactgctccccttcggtctcgcgatcgtttcggccgccttcaccctgaccatccacccg
gtgggcgcggtcgcggcggtcgcgctgctggccgggctccggccgatgctcaagcgggtg
ctgtaccggcggcgtcgcgacgggctggcgccgatgctggtgcccctcgtggcggcgggt
ctggccgtcctgtacgagatcttcgccgaccagccgctcgccacgatcgtcgagggcgtg
caggctcagggcatcgtgggtccgaccaatcactggtggaccgaggcgatgcggtactac
atcctgctcaatccgacacccgacggctccatcgcgcgccgggtcggaatcttcgtgacg
atcctgtcggtgctgctggtcgtcctcgtcctcgtccgcaagcacagcgtgccgggtgtg
gcgaccgcggccctgtggcggctcgtggccgtcaccggcggcgccgtggcggtgctggcc
ttcgtcccgaccaaggcgacccaccagatgggcatcttcgcctgcctggccgggccgctg
gccgcggccgcgaccgccttcctgaaaccgagtgtgcttcggcgcccatgcaaccggacg
ttcttcgccgcggcgtcggcgtacgcgctcgcggtggccttcgccggccgcaaccagtgg
tggtatgtgggcagctacggcatcccgtggtcggacgacacgccgcatatcgccggcatc
ggtttcttctggccgatcttcgccgtcgccgtactgctgacggccgtcggactgtggcag
tactaccgggacgacggccgagcacagttcgccgacgccgcggaacccttccggcgcccg
gagccgagccgtatggccgacctgccgatgtactcgctcgtgatcgtctccgcggtgatc
ctggccttcaacatgatctcgttcggtaaagcggccaggacgcaatcggattcgtggacc
tgggcgagttccaacatcgcgtccctgcaggggcgcccgtgcgcactcgccgacgccgtg
ctggtggaggccgatccgaacacgggtcttctcgcgccggcgcagttggccggccagcgg
cccgcgagcgccggccaggccctcgcgggcggagcgacgcccccggccgggttctcaccc
gacggcgtgccgacgcacttggagaccgacgacagcgacacgtccagcagtgacaccgac
gctcatcccgcccaagcggtcgaccaggatcagagcgggcagtcgaccaccggtgattcg
acgaccgccgacaccacctccgacaccagtggcggcaccacggtcagccgtggtgtcaac
ggttcgtcggtgaagctgcccttcggtctcgacccgcagcgggtgccggtgctcgggagc
ttcggtgcgcccgccgggaccggccgcctgacctcggactggtaccagctgcccgaacgc
tccgacgatcggcctctgatcaccctgtcggccgcgggtgcggtggagtcgatcgacgaa
ctggcggtccggcatccgggccagcaactgcggctcgaagccggacgggtgcagccggac
ggcaccgttgcaaccgtcgcgtccctgaccccgtacgacgcaggcggcgcaccgcagtgg
cgcaacctgcggttcccgatggccgagattcctcccggcgcgtccgtcgtccggatcgtc
gccgaggacacctcgccgggctacgatgcctggctggccgtcacgccaccgcgtgccaca
cgactgcagacgctcaattcgctcgtcggcagcgatgatccggtactgctcgactgggaa
gtcgcgttcgcgttcccctgccagcgcccggccggcgtggtgcacggcatcctcgagacg
ccgaagtggcgcatcacccccgatgcggtcggtgaacgggtgaactcggcgcagtggatg
gccggcgactacggcggcccgctgggcatcaccgagaacgagctgcgacagacggaggtc
ccggcctacctcgagaacgactggggccgtgactggggttcactgcagcggttcaccccg
ctcctgccgcagcacgacgccgaactcaccgtcacccacgaggaccacaccggtctctgg
actcccgggccgatgcgggtgatccgcaactga
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