Gordonia sp. YC-JH1: CXX93_13025
Help
Entry
CXX93_13025 CDS
T05256
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CXX93_13025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_13025
Enzymes [BR:
goc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CXX93_13025
DNA repair and recombination proteins [BR:
goc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CXX93_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
AUH70348
LinkDB
All DBs
Position
complement(2796853..2798793)
Genome browser
AA seq
646 aa
AA seq
DB search
MLGLAHLDRPFDYLVDAKTDADAQPGVRVRVRFAGRLVDGYLLERLDRSEHEGALSWLDR
VVSPEPVLTPELAALCRAVADRYAGTMADVLRLAIPPRHARVEKEAASHDVARPIAEPAA
AGWDVYDSGRSFIEQAVAGGHPHACWQALPGEDVAARLAELAASVAASGRGVVIVVPDQR
DLDRLEAACEPLLGDACVTLAAGLGPTARYRRWLSALRGRARVVIGTRSAVFAPVVDLGL
VVVFDDGDDSLDEPRSPYPHPREVAVLRAHGSGAALLIGGHSRTTDAQALVESSWAFDVV
APRAAVREAMPRVDGLSDEDRRVAGDPMARTARIPAIAFDAARRALAADQAVLFSVPRRG
YLPSVACARCRAHARCRACNGPLQMSERGDLACRWCGRPENRFVCPVCAGTAVRALMIGD
RRTAEELGRAFRGVPIVTSSGDKIVDEVPAGPRVVIATPGAAPRAPGGYGAAVLLDTWAQ
LDREDLRAAEEAVRAWMAVATLVRPRAEGGRVVVVADAAALPVQALIRWDPVGFATAELR
QRLELKFPPAVTMASVDGPPAAVSAFLDLLTMPPEAETLGPVPLPAGVRRPAGLDESGPV
DRMLLRTPRSAGRSLAEALRNAQALRNARHDDTAGIRVQVDPPTIG
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggctggctcacctggaccggcccttcgattacctcgtggacgccaagacggac
gcggacgcccagccgggcgtccgcgtccgtgtgcgtttcgccggccggttggtggacggc
tacctcttggaacggctcgaccgcagcgaacacgagggcgcgctgtcgtggctcgatcgc
gtcgtctcgcccgaacccgtcctcacccccgaactggccgcgctgtgccgtgcggtcgcc
gaccggtacgcgggcacgatggccgacgtcctgcggctggcgatcccgccgcggcacgca
cgggtggagaaggaggcggccagtcacgacgtggcgcggccgatcgccgagccggccgca
gccggctgggacgtctacgactcggggcggtcgttcatcgaacaggcggtcgccggaggg
catccgcacgcctgctggcaggcgctgcccggcgaggacgtggccgcccggctggccgaa
ctcgcggcgtcggtcgcggcatccgggcgcggggtggtgatcgtggtgcccgaccagcgg
gatctcgatcgtctcgaagcggcgtgcgaaccgctgctcggcgacgcctgcgtgactctc
gccgcgggcctcggtcccaccgcgaggtaccggcgctggctgtcggcgctgcgcggacgg
gcacgggtggtgatcggcacgcgcagcgccgtcttcgcacccgtcgtcgatctcggcctg
gtggtggtcttcgacgacggggacgacagtctcgacgagccgcggtcgccctatccgcac
ccgcgcgaggtggccgttctccgcgcccacggcagcggggcggcgctgctgatcggcgga
cactcccgcaccaccgacgcgcaggcattggtggagtcgagctgggcgttcgacgtcgtc
gccccgcgggccgcggtccgggaggcgatgccgcgcgtcgacggactctccgacgaggat
cgccgcgtggcgggcgatccgatggcgcggaccgcgcggataccggcgatcgccttcgac
gcggcccggcgagccctcgccgccgaccaggcggtgctgttcagcgtgcctcggcgcggt
tacctgccgtcggtggcgtgcgcccggtgccgcgcgcacgcccggtgccgagcctgcaac
ggtccgctgcagatgagcgaacgcggcgacctcgcctgccggtggtgcggacgaccggag
aaccgcttcgtctgtccggtgtgcgcgggcaccgcggtgcgcgcgttgatgatcggggat
cggcgcaccgccgaagaactcggacgcgccttccgcggcgtcccgatcgtcacctcctcc
ggcgacaagatcgtggacgaggtgccggccgggccgcgggtggtgatcgccacgccgggc
gcggcgccgcgcgcgccgggcggctacggggccgcggtgctgctcgacacctgggcgcag
ctggaccgggaggatctgcgtgccgccgaggaggcggtccgcgcctggatggcggtggcg
acgctggtgcggccccgtgccgagggcggccgcgtggtggtggttgccgacgcggccgcg
ttgccggtacaggcgctcatccggtgggatccggtgggattcgccaccgccgagctgcgg
caacggctggagttgaagttcccgcccgcggtgacgatggcgtcggtggacggaccgccc
gcggccgtgtcggcgttcctcgacctgctcaccatgccgccggaggccgagacgctgggg
ccggtgccgctgcccgcgggggtgcgccgtcccgccggcctggacgagtcggggccggtg
gatcgcatgctgttgcgcacaccgcgcagcgccgggcggtcactggccgaggcactgcgt
aacgcccaggcgctccggaacgcccggcatgacgacaccgcgggcatcagggtccaagtc
gatccccctacgattggttga
DBGET
integrated database retrieval system
