Gordonia sp. YC-JH1: CXX93_13065
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Entry
CXX93_13065 CDS
T05256
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00220
Arginine biosynthesis
goc00240
Pyrimidine metabolism
goc00250
Alanine, aspartate and glutamate metabolism
goc01100
Metabolic pathways
goc01110
Biosynthesis of secondary metabolites
goc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CXX93_13065 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CXX93_13065 (carB)
00220 Arginine biosynthesis
CXX93_13065 (carB)
Enzymes [BR:
goc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CXX93_13065 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AUH69101
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Position
complement(2805093..2808422)
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AA seq
1109 aa
AA seq
DB search
MPRRTDISHVLVIGSGPIVIGQACEFDYSGTQACRVLKAEGLRVSLVNSNPATIMTDPEF
ADATYVEPITPEYIEKVIETEAAGGHPIDAVLATLGGQTALNAAVGLHEKGILAKHDIEL
IGADFDAIQRGEDRQMFKDIVTEIGGESARSRVCHTMEEVHATVEELGYPVVVRPSFTMG
GLGSGMAYDEADLDRIAGGGLAASPTANVLIEESILGWKEYELELMRDNKDNVVVICSIE
NVDPVGVHTGDSITVAPAMTLTDREYQIMRDQSIAILRKVGVDTGGCNIQFAQNPRDGRL
VVIEMNPRVSRSSALASKATGYPIAKMAAKLAIGYSLDEIMNDITRVTPACFEPALDYVV
VKAPRFAFEKFPGADDTLTTTMKSVGEAMSLGRSFAEAFGKVMRSLETKAAGFWTEADRP
DPATIDTEALLSEVSVGRDGRMYKIMLLLEAGVGIDRIYEATSIDPWFLAEIDGIRQIGH
EVRDAESLDEFTLRVAKSNGLSDRQIAVLRGTDEDAIRELRTGMGVRPVYKTVDTCAAEF
EAKTPYHYSSYELDPAATTEIAAQTERPKVLILGSGPNRIGQGIEFDYSCVHAALTLSEA
GYETVMVNCNPETVSTDYDTADRLYFEPLTFEDVLEVYHAESQSGTVAGVIVQLGGQTPL
GLAARLEAAGVPIVGTSPAAIDLAEDRGEFGKVLVEAGLPAPQFGTATTFEGAKDIAAGI
GYPVLVRPSYVLGGRGMQIVYDEQGLADYIANATEISDDRPVLVDRFLEGAVEIDVDALC
DGDEVYIGGIMEHIEEAGIHSGDSACALPPITLGADVVERVRTSTAALARGLGVRGLMNV
QYALAGDVLYVLEANPRASRTVPFVSKATAVPLAKACARVMLGMSIAELRTQGILPAEGD
GSVTPANAPVAVKEAVLPFNRFRREDGTGVDSLLSPEMKSTGEVMGLDDDFGRAFAKSQE
AAGGALPRSGTVFVSVADRDKASIISPMKRLADLGFTVLATGGTADVLRRNGIQVETVRK
YFEAKEGERTVIDAIRERKVDLIINTPFGTAGPRVDGYEIRAAAIAATVPFITTVQGAGA
AVLGIEATLNATMSVRSLQRRHAEMQAGK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgccgtacagacatctcccacgttctggtgatcgggtccggcccgatcgtcatc
ggccaggcctgcgagttcgactactcgggcacccaggcctgccgggtgctcaaggccgag
ggcctgcgcgtgtcgctggtcaactccaatccggccacgatcatgaccgatcccgagttc
gccgacgccacgtacgtggagccgatcactccggagtacatcgagaaggtcatcgagacc
gaagccgccggcggccacccgatcgacgccgtgctcgcgaccctgggcggtcagaccgcg
ctcaacgcggcggtcggcctgcatgagaagggcattctcgccaaacacgacatcgagctg
atcggcgccgacttcgacgccatccagcgcggcgaggaccgccagatgttcaaggacatc
gtcaccgagatcggtggcgagagcgcccgctcgcgggtctgccacaccatggaggaggtg
cacgcgaccgtcgaggagctcggctacccggtggtggtgcggccgtcgttcaccatgggc
ggactcggctccggcatggcctacgacgaagccgatctggaccggatcgccggcggcggc
ctggcggcctcgcccacggcgaacgtcctgatcgaggagtccatcctcggctggaaggag
tacgagctcgagctgatgcgcgacaacaaggacaacgtcgtcgtgatctgctcgatcgag
aacgtcgatccggtcggtgtgcacaccggcgactcgatcaccgtcgcacccgcgatgacg
ctgaccgaccgcgagtaccagatcatgcgcgatcagtcgatcgccatcctccgcaaggtg
ggcgtcgacaccggcggttgcaacatccagttcgcccagaacccgcgcgacggccgactg
gtggtcatcgagatgaacccgcgagtgtcgcgctcgtcggcgctggcgtcgaaggcgacc
ggctacccgatcgccaagatggcggccaagctggccatcggctactcgctcgacgagatc
atgaacgacatcacccgggtcacgcccgcgtgcttcgagccggcgctcgactacgtggtc
gtcaaggctccgcgtttcgcgttcgagaagttcccgggcgccgacgacacgctgaccacc
acgatgaagtcggtgggcgaggcgatgagcctgggccgcagtttcgccgaggccttcggc
aaggtgatgcgatcactggagaccaaggcggcgggcttctggaccgaggccgaccggccc
gacccggcgaccatcgacaccgaggcgctgctgtcggaggtgtcggtcggcagggacggc
cgcatgtacaagatcatgctgctgctggaggcgggcgtcggcatcgaccggatctacgag
gcgacctcgatcgacccgtggttcctggccgagatcgacggcatccgacagatcggtcac
gaggtccgcgacgccgagagcctcgacgagttcaccctgcgggtcgccaagagcaacgga
ctctcggaccgccagatcgcagtcctccgcggtaccgacgaggacgcgatccgcgaactg
cggacgggcatgggcgtgcgcccggtctacaagacggtcgacacgtgcgccgccgagttc
gaagcgaagaccccgtaccactacagctcctacgagctcgatccggcggcgaccaccgag
atcgccgcgcagaccgaacggcccaaggtgctgatcctgggctcgggacccaaccgaatc
ggccagggcatcgagttcgactactcctgcgtccacgccgcgctcacgctgtcggaggcc
ggctacgagacggtcatggtgaactgcaacccggagacggtctccaccgactacgacacc
gccgaccgcctgtacttcgagccgctgaccttcgaggacgtcctggaggtgtaccacgcc
gaatcgcagtcgggcaccgtcgcgggcgtcatcgtccaactcggcgggcagactccgctg
gggctcgccgcacggctcgaggccgcgggcgtgccgatcgtcggcaccagcccggccgcc
atcgatctggcggaggaccgcggcgagttcggcaaggtgctcgtcgaggcgggcctgccc
gcaccgcagttcgggaccgccaccaccttcgagggcgccaaggacatcgcggccggaatc
ggctacccggtgctggtccgcccgtcgtacgtgctcggcggccgcggcatgcagatcgtc
tacgacgagcaggggctggccgactacatcgcgaacgccaccgagatctccgacgaccgc
ccggtgctcgtcgaccggttcctggagggcgctgtcgagatcgacgtcgacgcgctgtgc
gacggtgacgaggtctacatcggcggcatcatggagcacatcgaggaggccggcatccac
tcaggcgactcggcgtgcgcgctgcccccgatcacgctcggcgccgatgtggtggagcgg
gtgcggacctcgaccgcggcgctggccaggggtctgggcgtgcgcggcctgatgaacgtt
cagtacgcgctcgccggcgacgtgctgtacgtgctcgaggccaacccgcgggcgagccgc
acggtgcccttcgtctcgaaggccaccgcggtgccgctggcgaaggcgtgcgcgcgagtc
atgctgggcatgtcgatcgccgaactgcgcacccagggcatcctgcccgcggagggcgac
ggttcggtcaccccggcgaacgccccggtggcggtcaaggaggccgtgctgccgttcaac
cgcttccggcgggaggacgggaccggcgtcgactcgctgctgagtcccgagatgaagtcg
accggtgaggtcatgggactcgacgacgatttcggccgcgccttcgccaagtcgcaggag
gcggccgggggagcgctccctcgctcgggcacggtcttcgtgtcggtggccgatcgcgac
aaggcctcgatcatctccccgatgaagcgcctcgccgacctgggcttcaccgttctcgcc
accggcggtaccgcggacgtgctgcgccgcaacggtatccaggtggagaccgtgcgcaag
tacttcgaggccaaggagggtgagcggaccgtcatcgacgccatcagagagcgcaaggtg
gacctcatcatcaacacgccgttcggcaccgccggaccgcgcgtcgacgggtacgagatc
cgtgccgccgcgatcgccgcgacggtgccgttcatcaccaccgtgcagggtgcgggcgcc
gcggtgctcggcatcgaggcgacgctgaacgccacgatgagcgtgcgatcactgcagcgc
cgccacgcggagatgcaggcgggcaagtga
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