Gordonia sp. YC-JH1: CXX93_14170
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Entry
CXX93_14170 CDS
T05256
Name
(GenBank) diguanylate phosphodiesterase
KO
K07682
two-component system, NarL family, sensor histidine kinase DevS [EC:
2.7.13.3
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CXX93_14170
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
goc01001
]
CXX93_14170
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
goc02022
]
CXX93_14170
Enzymes [BR:
goc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CXX93_14170
Protein kinases [BR:
goc01001
]
Histidine kinases
NarL family
CXX93_14170
Two-component system [BR:
goc02022
]
NarL family
DevS-DevR (redox response)
CXX93_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
GAF_2
HATPase_c
HisKA_3
HATPase_c_2
GAF_3
Motif
Other DBs
NCBI-ProteinID:
AUH69273
LinkDB
All DBs
Position
complement(3039525..3041150)
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AA seq
541 aa
AA seq
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MTRRRDLAEVHAALDALAHASVEDPTALRDLLEAVLLVGRGLELDQALQRIVEVAADVLD
ARYCALGVRGPELGLQAFVYTGIEPEVRARMGPLPVGRGVLGELLHRPEVLRIPKLSDHP
ASVGFPPNHPPMDTFLGAPIIVRDELFGSIYLTEKQGAPEFTPLDEKIVAVLAVAAGIAV
DNARAFERAQARLRWMQVIADRGSEPLAGTALEDTLDGLCRDVSALTGAVDVFIVTGSVL
TGHTGTAPCTEDLFEVVDPDNERADGKLLVREVRTHTVPWLRHGARWVSMQPLQPTNGRS
AIVLTHPERRVWTGEEVAGLQGVARVASLALAYADQQELARDLQLLEDRHRIARDLHDLV
IQRLFAIGMSLQTMQAGSASADDARMEQVITDLDATIAQIRTSIFDLQGLPGHGEAATLR
RRALDVVAELATHAPIVPSVAFMGPVDTLVPDALAPHIEAVLREGISNALRHSGAEHIRV
RIAADDVVTVEISDDGCGIPPTARQSGLANLTRRADDCDGSFTITSSAASGTTLTWTAPL
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaggcgcgatctggcggaggtccacgcggcactcgacgcgctcgcccacgcc
agcgtcgaggacccgaccgcgctccgcgacctgctcgaagcggtcctgctggtgggtcgc
ggtctcgaactcgaccaggcgctgcagcggatcgtcgaggtggcggccgacgtcctcgac
gcccgatactgtgcgctcggggtccgcgggcccgagctcggtctccaggcgttcgtgtac
acgggcatcgaaccggaggtccgcgctcggatggggccgctgccggtgggccgcggcgtc
ctcggcgaactgctgcaccgtcccgaggtgctgcgcataccgaagctgtccgatcatccg
gcctcggtggggttcccgcccaaccatccgccgatggacaccttcctgggcgcgccgatc
atcgtccgcgacgagttgttcggcagcatctacctgactgagaagcagggtgcccccgag
ttcacgccgctcgatgagaagatcgtcgcggtcctcgcggtggccgcgggcatcgcagtc
gacaacgcgcgcgccttcgagcgggcccaggcccggctgcgctggatgcaggtgatcgcc
gaccgcggatccgaaccgctggcgggcacggcgctcgaagacaccctcgacggactgtgc
cgcgacgtctccgcgctcaccggggcggtggacgtgttcatcgtgaccggcagcgtcctc
accggacacaccggtaccgcgccctgcaccgaggacctgttcgaggtcgtcgacccggac
aacgagcgcgccgacggcaagctcctggtccgcgaggtgcgaacacacacggtgccgtgg
ctgcggcacggagcgcggtgggtctcgatgcagcccctgcagccgaccaacggccggagc
gcgatcgtcctcacccaccccgagcgacgggtctggaccggggaggaggtcgcgggcctg
cagggtgtcgcgcgcgtggcctcgctggccctggcctacgccgaccagcaggaactggcg
cgcgatctgcagttgctcgaagaccgccaccggatcgcccgcgacctgcacgatctggtg
attcagcggctcttcgcgatcgggatgtcgctgcagaccatgcaggccgggtccgcctcg
gccgacgacgcccggatggagcaggtcatcaccgacctcgacgccaccatcgcgcagatc
cgcacctcgatcttcgatctgcagggccttcccggtcatggcgaggcggcgacgctgcgc
aggcgcgcgctcgacgtggtcgccgagttggcgacccatgcgccgatcgtgccgagcgtc
gcgttcatggggccggtcgacacgctcgtccccgacgccctggcgccgcacatcgaggca
gtgctgcgggagggcatctccaacgcgctccggcattcgggcgccgagcacatccgggtg
cgcatcgcggccgacgacgtcgtgaccgtcgagatctccgacgacggatgcggtattccg
ccgaccgcccggcagtcgggactggcgaacctgacccgccgcgccgacgactgcgacggc
agcttcacgatcacctcgagcgcggcgtcgggcaccacgttgacgtggaccgcgccgttg
cgctga
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