KEGG   Gordonia sp. YC-JH1: CXX93_14395
Entry
CXX93_14395       CDS       T05256                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
goc  Gordonia sp. YC-JH1
Pathway
goc02024  Quorum sensing
goc03060  Protein export
goc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:goc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CXX93_14395
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CXX93_14395
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CXX93_14395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:goc02044]
    CXX93_14395
Enzymes [BR:goc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CXX93_14395
Secretion system [BR:goc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CXX93_14395
  Eukaryotic Sec-SRP protein
   CXX93_14395
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 nSTAND3 APS_kinase cobW AAA_31 TctA Zeta_toxin CLP1_P ArsA_ATPase MeaB AAA_16 AAA_18 AAA_33 NPHP3_N TsaE ATP_bind_1 AAA_25
Other DBs
NCBI-ProteinID: AUH69307
LinkDB
Position
complement(3086214..3087791)
AA seq 525 aa
MFESLSDRLTGALKDLRGKGRLTDADIDATAREIRLALLEADVSLPVVRAFISRIKERAK
GAEVSGALNPAQQIVKIVNEELVGILGGETRRIRLAKNPPTVIMLAGLQGAGKTTLAGKL
SAWLVKQGHTPLLVACDLQRPGAVQQLQIVGERAGVPVFAPHPGTSVGGEGELGVDGSAD
PVAVARAGVQEARDKQHDVVIIDTAGRLGIDAELMRQASDIRDATDPDEVLFVLDAMIGQ
DAVTTAQAFADGVDFTGVVLTKLDGDARGGAALSVREITGRPIMFASTGEKLDDFDVFHP
DRMASRILGMGDVLSLIEQAEQHFDQAEAEKTAAKISQGELTLEDFLQQMLMIRKMGPIG
NLLGMLPGAGDMKDALSQVDDKQLDKIQAIIRGMTPAERDNPKIINASRRIRIANGSGVT
VTDVNQLVDRFFAARKMMSQMSGRMGMGGGRKNARKGKKGKKGKGKGRGPTPPKAMRGGF
PGMPGMPPGMGLPPGLDLSNMPPGLDELPPGLEGIDLNDLKFPKK
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgttcgaatccctctctgaccggttgaccggtgctctgaaggacctgcgcggcaaggga
cggctgaccgacgcggacatcgacgcgaccgcgcgcgagatccgcctcgcactgctcgag
gccgacgtctcgctgcccgtggtccgcgccttcatcagccgcatcaaggaacgtgcgaag
ggcgccgaggtctccggcgccctgaatccggctcagcagatcgtcaagatcgtcaacgag
gaactggtcggcatcctgggcggcgagacgcggcgcatccgcctcgccaagaacccgccg
acggtcatcatgctcgccggtctgcagggcgccggtaagacgaccctcgcgggcaagctg
tcggcgtggctggtcaagcagggtcacacgccgctgctcgtggcctgtgacctacagcgc
cccggcgccgtgcagcagctccagatcgtcggtgagcgggccggagtcccggtcttcgcg
ccgcatccgggcacctcggtcggcggcgagggcgaactcggcgtcgacggctcggccgat
ccggtcgccgtcgcacgggccggcgtgcaggaggcccgcgacaagcagcacgatgtggtc
atcatcgacaccgcgggccgtctgggcatcgacgcggaactgatgcggcaggcctccgac
atccgggacgcgaccgacccggacgaggtgctgttcgtcctcgacgccatgatcggccag
gacgcggtcaccaccgcccaggccttcgccgacggcgtcgacttcaccggcgtggtcctc
accaagctcgacggcgacgcccggggcggcgccgcgctctcggtccgcgagatcaccgga
cggccgatcatgttcgcctcgaccggtgagaaactcgacgacttcgacgtcttccatccg
gaccgcatggccagccgcatcctggggatgggcgacgtcctctcgctcatcgagcaggcc
gagcagcacttcgaccaggccgaggcggagaagaccgctgccaagatcagccagggcgag
ctgacgctggaggacttcctgcagcagatgctgatgatccgcaagatgggaccgatcggg
aacctgttgggcatgcttcccggcgcaggcgacatgaaggacgcgctctcgcaggtcgac
gacaagcagctcgacaagatccaggcgatcatccggggcatgacgcccgccgagcgcgac
aacccgaagatcatcaacgcctcccgacggatccgcatagcgaacggctccggcgtcacg
gtgaccgacgtgaaccagctcgtcgaccggttcttcgccgcacgcaagatgatgtcgcag
atgtcgggccggatgggcatgggcggcggccgcaagaacgcgcgcaagggcaagaagggc
aagaaggggaagggcaagggtcgcggacccacgccgcccaaggcgatgcgcggcggattc
ccgggcatgcccggcatgccgccgggcatgggactgccgcccggtctggatctgagcaac
atgcctcccggcctcgacgaactgccgcccggtctggagggcatcgacctcaacgacctg
aagttccccaagaagtag

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