Gordonia sp. YC-JH1: CXX93_14435
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Entry
CXX93_14435 CDS
T05256
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
goc
Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
goc03036
]
CXX93_14435 (smc)
Chromosome and associated proteins [BR:
goc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CXX93_14435 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
CENP-F_leu_zip
Sas-6_C_CC
Motif
Other DBs
NCBI-ProteinID:
AUH69314
LinkDB
All DBs
Position
complement(3097667..3101305)
Genome browser
AA seq
1212 aa
AA seq
DB search
MHLKSLTLKGFKSFASSTTLRFEPGITCVVGPNGSGKSNVVDALTWVMGEQGAKALRGGK
MADVIFAGTSGRAPLGRAEVTLTIDNSDGALPIEYSEVSVTRRMFRDGAGEYEINGNSCR
LMDVQELLSDSGIGREMHVILGQGRLAAILEARPEERRAFIEEAAGVLKHRRRKEKAVRK
LDAMAANLDRLTDLTTELRRQLKPLGRQAEVARRAATVQADLRDARLRLAADDLVKRREE
MAQHSAVEADVRRQQDEVAAALDAATEALSAAQEHLAQVAPAASEAGRVFYQLGALSERV
GGTLRLAGERAANLASPSVANSGPDPEELERQAERAAMTEAEHTEAVEEAAERLEYATAA
LQAAEQVANEAERAHLAAVQAVADRREGLARLEGEAANLRTKVESVDAETARLTASIEAA
AERADTAQAALDQEVARVRILEDAERGLDEHHERCAAALAEASATVERLRQSERETARSI
ASLSARIEALSVGLERGDGGAWLIERGTEGVLVPLSELLTVKPGYEAAMAGALGPAADAI
TTVDALAAVRALRELRSGDGGRAALIVGGLPGVDPDRRPSLPDGAVWARDLVTAPDEVAG
ALDVLLAETIVVDDPETGLDLARELGVVGVTRDGDRISSASVEGGSARRPSTIEVQSAID
TATHDLAAAEETALRLESELAAAIAEQERAREDAEGALAALHESDANLGAAYESLGRLGS
DIRAARDEADRLVRQRNFVEQGRAENLEKLTEVEERLARAVDGAAEEPVADGDRAMRDAA
AAEVASARSAEVETRLTLRTAEERLASVRGKAESLRRAAANERANRERQRRQDALRKYAA
GVASAVADTGERLADAVAAAVTDAAQARDELEAIRSQRTAEVDALRAQVDQLSTVMNKLR
DAVHRDELARAQAALRIEQLEEQVLEQFAIAPDDLVAEYGPDVPMPPSDLEMREYEDAKA
RGEQVVAPAPMPFDRATQEMRARKAEKDLKTLGRVNPLALEEFAALEERYNFLSAQLEDV
KAARKDLMDVIDDVDARILQVFTDAYADVEREFVQVFATLFPGGEGRLVLTDPDDMLTTG
VDVEARPPGKKVKRLSLLSGGEKSLTAVAMLVAIFRARPSPFYVMDEVEAALDDANLRRL
ISLFEQLREKSQLIVITHQKPTMEIADALYGVSMRGDGITQVISQRLRGVDVTPAAAAPD
PSTSPTDSAPTS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtgcacttgaagagcctcaccctgaaagggttcaaatcgttcgcgtcgtcgacgacgctg
cggttcgagcccggcatcacgtgtgtggtggggcccaacgggtcgggcaagtcgaatgtc
gtcgacgccctgacctgggtgatgggggagcagggggccaaggccctgcgcggcggaaag
atggccgacgtcattttcgccgggacctccggtcgcgccccgctgggccgcgcggaagtg
accctgaccatcgacaactcggacggcgcgctgccgatcgagtactccgaggtgtcggtg
acgcggcgcatgttccgcgacggcgcgggcgagtacgagatcaacggcaattcgtgccgc
ctgatggacgttcaggaactgctgtccgattcgggcatcggccgcgagatgcacgtcatc
ctggggcagggccggctggcggcgatcctggaggcccggccggaggaacggcgcgcgttc
atcgaggaggccgccggggtcctcaagcatcgtcgccgcaaggagaaggcggtccgcaaa
ctcgacgcgatggccgccaacctggaccgtctcaccgatctgacgacggaactccgccgc
cagctcaagccgctcggccggcaggccgaggtggcgcggcgcgcggcgaccgtccaggcc
gacctgcgcgacgcccgcttgcggctggccgccgacgacctcgtgaagcgacgcgaggag
atggcgcagcacagcgccgtggaggccgacgtccggcgacagcaggacgaggtggcggcc
gcgctggacgccgccacggaggcgctgtcggcagcacaggagcatctggcgcaggtggcg
cccgcggcgagtgaggccggacgcgtcttctaccaactcggcgcactgtcggagcgggtc
ggcggcacgttgcggctcgccggtgaacgcgcggcgaacctggcctcgccgagcgtcgcc
aactccggtcccgatcccgaggaactggaacggcaggccgaacgcgctgcgatgaccgag
gccgagcacaccgaggcggtcgaggaggccgccgagcggctggagtacgcgaccgccgcg
ctgcaggccgccgagcaggtggccaacgaggccgagcgcgcgcacctggccgcggtgcag
gccgtcgccgaccgccgcgagggtctggcgcggttggagggcgaggccgcgaacctgcga
accaaggtggagtcggtggacgccgagaccgcccggctgacggcgtcgatcgaggcggcc
gccgagcgggccgacaccgcgcaggcggccctcgatcaggaggtggcgcgggtcaggatc
ctcgaggacgccgaacgcggcctcgacgagcaccacgaacgatgtgcggcggcgctggcc
gaggcctccgcgaccgtcgaacggctccgccagagtgagcgcgagaccgccagatcgatc
gcgtcgctcagcgcgcggatcgaagcgctctcggtcggtctggaacgcggtgacggcggg
gcctggctgatcgaacgcggaaccgagggcgtcctcgtgccgctgtcggagctgctgacg
gtgaagccgggctacgaagccgccatggcgggagcgctggggccggccgccgatgcgatc
acgacggtcgacgcgctcgccgcggtgcgggccctgcgcgaactgcgcagcggcgacggc
gggcgagcggccctcatcgtcgggggactgcccggcgtcgaccccgaccgtcggccgtcg
ctgcccgacggtgcggtgtgggcccgtgacctggtcaccgcacccgacgaggtggcgggc
gcgctcgacgtactgctcgccgagacgatcgtcgtcgacgatcccgagaccgggctggac
ctggcccgtgagctcggagtggtcggcgtcacgcgcgacggcgaccgcatctcctcggcc
agcgtggagggcggatccgcacgacggccgtcgaccatcgaggtgcagtccgcgatcgat
accgcgacacacgacctcgcggccgccgaggagacggcactgcgtctggaatcggagctg
gccgcggccatcgccgaacaggaacgggcgcgtgaggacgccgagggggcgctcgctgcc
ctccacgagtccgacgcgaacctcggggcggcctacgagtcgctcgggcgtctcggttcg
gacatccgtgctgcacgggatgaggccgaccggctcgtgcggcaacgcaacttcgtcgaa
cagggccgcgcggagaatctcgagaagctcaccgaggtggaggagcgcctggcccgcgcc
gtcgacggtgcagccgaagagccggtcgccgacggcgacagagcgatgcgcgatgccgcc
gcggcggaagtcgcgtccgctcggtccgccgaggtcgagacgcgtctgacactgcggacc
gccgaggaacgcctggcgtcggtgcgcggcaaggccgagagtctgcgtcgcgcggcggcc
aacgagcgggccaatcgggagcgccagcggcgccaggacgctctccgcaagtacgcggcc
ggcgtggcgagtgcggtggccgacaccggagaacgactcgcggacgcggtggccgcggcc
gtgaccgacgcggcgcaggctcgcgacgaactcgaagccatccgttcccagcgcacggcc
gaggtggacgccctgcgggcgcaggtggaccagctcagcacggtgatgaacaaactgcgc
gacgccgtccaccgcgacgaactcgccagagcgcaggccgccttgcgcatcgaacagctc
gaggaacaggtgctcgaacagttcgcgatcgcgccggacgacctggtggccgagtacgga
ccggatgtcccgatgccgccgtcggatctggagatgcgcgagtacgaggacgccaaggct
cgcggcgaacaagtggtggcccccgcgccgatgcccttcgaccgcgccacccaggagatg
cgtgcgcgcaaggcggagaaggacctcaagacactcggccgcgtgaacccgctcgccctg
gaggagttcgcggccctcgaggaacgctacaacttcctgtcggcgcagctggaggacgtg
aaggctgcgcgcaaagacctgatggacgtcatcgacgacgtcgacgcccggatcctccaa
gtcttcaccgatgcgtacgccgacgtggagcgagagttcgtccaggtcttcgcgacgctg
ttccccgggggcgagggccggctggtcctgaccgatccggacgacatgctcaccaccggg
gtggacgtggaggcgcggccgccgggcaagaaggtgaagcgactgtcgttgctctccggc
ggcgagaagtcgttgaccgccgtcgccatgctcgtcgcgatcttccgggcgcggccctcg
cccttctacgtgatggacgaggtggaggccgccctcgacgacgcgaatctgcgcaggctc
atctccctgttcgaacaattgcgggagaagtcccagctgatcgtcatcacccaccagaaa
ccgaccatggagatcgcggacgcgctctacggcgtgagcatgcggggcgacgggatcacc
caggtgatctcccaacgactgcgcggggtggacgtgaccccggccgccgccgcacccgat
ccttcgacttcaccaaccgactccgctcccacgagctga
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