Gordonia sp. YC-JH1: CXX93_14855
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Entry
CXX93_14855 CDS
T05256
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CXX93_14855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goc03019
]
CXX93_14855
03009 Ribosome biogenesis [BR:
goc03009
]
CXX93_14855
Messenger RNA biogenesis [BR:
goc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CXX93_14855
Ribosome biogenesis [BR:
goc03009
]
Eukaryotic type
Pre-60S particles
RNases
CXX93_14855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AUH69377
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All DBs
Position
3187572..3188171
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AA seq
199 aa
AA seq
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MQDKLVWIDCEMTGLDIGSDKLIEIAALVTDSDLNIIGEGVDLVIHADDEALAGMPEVVA
KMHADSGLTEEVRASTVTLAEAEKAVLDYLREHITTAGAAPLAGNSIGTDRGFIARDMPE
LNAYLHYRMVDVSSIKELCRRWYPPIYFGQPQKGLAHRALADIRESIRELRYYRETAFVP
APGPDAKTLEEVVERLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacaaactcgtgtggatcgactgtgagatgaccggactggatatcggctcggac
aagctcatcgaaatcgccgctctcgtcaccgacagcgacttgaacatcatcggcgagggg
gtcgacctcgtcatccacgccgacgacgaggccctcgcgggcatgcccgaggtggtcgcc
aagatgcatgccgactccgggctcaccgaagaggtgcgcgcctccaccgtcacgctcgcc
gaagcggagaaggcggttctggactacctgcgcgagcacatcaccacggccggcgcggcc
ccgctcgcgggcaactccatcggcaccgatcgcggcttcatcgcccgggacatgcccgag
ctgaacgcctacctgcactatcggatggtggacgtcagctcgatcaaggagctgtgccgt
cgctggtacccgccgatctacttcggtcagccgcagaaggggctcgcccatcgcgcactc
gccgacatccgcgaatcgatccgggaactgcgctactaccgcgagaccgccttcgttccc
gcccccggccccgacgcgaagaccctcgaagaggtcgtcgaacggcttggccccgcgtaa
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