Gordonia sp. YC-JH1: CXX93_15955 Help Entry CXX93_15955       CDS       T05256                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism goc  Gordonia sp. YC-JH1 Brite KEGG Orthology (KO) [BR:goc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:goc03400]     CXX93_15955 Enzymes [BR:goc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      CXX93_15955     5.6.2.6  RNA 3'-5' helicase      CXX93_15955 DNA repair and recombination proteins [BR:goc03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     CXX93_15955 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_3rd_Lhr DEAD WHD_2nd_Lhr WHD_4th_Lhr Helicase_C AlkZ-like ResIII DUF6406 HTH_Crp_2 Fe_dep_repress PhoH MarR_2 Cas3-like_C_2 Motif Other DBs NCBI-ProteinID:  AUH69547 LinkDB All DBs Position 3434954..3439600 Genome browser AA seq 1548 aa AA seqDB search MHPATQRWFSDAFGAPTRAQSGAWTAIARGENTLVVAPTGSGKTLAAFLWAIDSLYRERI DAATGGSAGTAPGVRILYISPLKALAVDVERNLSAPLVGIAHAAQIMGLDAPSITVGVRS GDTSAADRRRLQTHPPDILITTPESLYLMLTSSVRETLATVTTVIVDEVHAVAATKRGTH LALSLERLDALLERPAQRIGLSATVRPEELVGEFLAGEGDCTVVKPPAAKTFDLSVDVPV EDMTAIPPPDTGTDDLDDAFSPTAGSLWPHVESAIVDRIEENRSTIVFANSRRLAERLTA RLNEIAAERAGIEFDPDRPNPTVPGGMPAYVSASGDTAGAPAVLARAHHGSVSKEQRAQI EDDLKSGTLRCVVATSSLELGIDMGAVDLVIQVEAPPSVAAGLQRIGRAGHQVGEVSRGV LFPKHRTDLIHCTVVAQRMLAGRIEALSVPANPLDILAQQTIAATAVDDLDVDEWYATVR RAMPYRTLTRDVYDAVLDLISGRYPSDEFAELRPRVDYDRAAGRLTARRGTLRLAVTSGG TIPDRGLFGVFLVGGTDRAESSQPRRVGELDEEMVYESRVGDVFALGASSWRIEEITHDR VLVSPAFGMPGRLPFWIGDAVGRPAELGAAIGEFIGIAGDAEKLAALAAELGLSANAERN LSALIAQQRDATGVLPTDRTLVLERFRDELGDWRLVLHSPYGLRVHAPWAGAVAAQLSAR LGIDGATTATDDGIIVRLPDTDDDPPGADVFLLDPEHIEADVTRALADSSLFASRFRECA GRALLLPRRDPGKRAPLWQQRQRSAQLLAVASRFGDFPIILETVRECLSDVYDLPSLVDV LTRIMQRRMRITEVETSTPSPFAASMLLGYVGSFIYDDDAPLAERRATALSLDTALLAQL LGRVDLRELLDPAVITEVVARLQRTAPERRARDDQDVVDLLRWLGPCTPRQIAERYRGDD PLAVPLDEVLERLLADGRLIEVPFRGATALASVDDAARLRDGLGIPLPLGVPVAYLQAVA DPLADLVHRYARTHGPFTTADVAEALGMAPAVVTRTLEELAARRTVIEGEFIPLPPEPQT GRTPSQWCHSDVLTQLRRGSLAAGRAEVEPVSAEAYTRFLLGWQHVTGKSRLRGAAGVAA VVEQLAGQPIPASAWETLVLPARVEDYRPSMLDELTASGEVIWSGHGAIGGADGWVALHL ADAAALTLRPAEDAEPTPAQEAVRTALDRGGALRFRELSDALNSAEHAIPDGELPDLLWD LVWAGIITNDSFSVVRAALNPPRSARSSATSAHRTRGRPPRLRAARLSSQYLAGAAGTAA TPPTVGGRWSVIRRIPVDPTTAAAATCDVLLDRYGVVTKGAVTAESTEGGFARIYKALGV FEDNGQVRRGYYIDGLGGAQFAAGHTVDILRESTVVSREERCAAVVLAATDPANPYGAAL DWPERAVESGHRPGRKPGAVVILVGGRAAVFIERGGKTVLTFTAETELLEAAAAALSHAV TTGAVPRIHIDQVDGEPVRRTSLGERLVASGFATTPRGLRMNYDPRSR NT seq 4647 nt NT seq  +upstreamnt  +downstreamnt atgcatccggccacgcagcggtggttcagcgacgcgttcggcgcgccgacccgagcccaa tccggtgcgtggacggcgatcgcccgcggcgagaacaccctcgtcgtggctccgaccggg tcgggcaagaccctcgcagccttcctgtgggccatcgactcgctgtaccgcgagcggatc gacgccgcgaccggcggcagtgcgggcaccgctccgggtgtccggatcctctacatctca ccgctcaaggcactcgccgtcgacgtggagcggaacctgtcggcaccactggtgggcatc gcgcacgcggcgcagatcatgggactcgacgcaccgtcgatcacggtcggagtccggtcc ggggacacctcggcggccgaccgccgacggctgcagacccatccgcccgacatcctgatc accacgcccgaatcgctctacctgatgctgacctcctcggtgcgcgagaccctcgccacg gtgacgacggtgatcgtcgacgaggtgcacgccgtcgcagcgaccaagcggggcacgcac ctggcgctctcgctcgaacggctcgatgcgctgctcgagcggcccgcgcagcgcatcggg ctgtcagcgaccgtgcggcccgaggaactcgtcggcgagttcctggcgggcgagggcgac tgcaccgtcgtgaagccgcctgcggcgaagaccttcgacctctccgtggacgtgccggtg gaggacatgaccgccatcccgccgccggacaccgggacggacgatctcgacgacgccttc tccccgaccgccggttccctctggccccacgtggagtcggcgatcgtcgaccgcatcgag gagaatcgctcgacgatcgtcttcgcgaactctcgtcgtctcgccgaacgtctgaccgcc cggctgaacgagatcgccgccgaacgcgcgggcatcgagttcgacccggaccgaccgaac ccgacagtgcccggcgggatgcccgcctacgtctcggccagtggagacacggcgggcgcg cctgccgtcctcgcccgcgcccaccacggctcggtgagcaaagagcagcgtgcacagatc gaggacgatctgaaatccggcacgctccggtgcgtggtcgcaacgagctcactggaactc ggcatcgacatgggtgccgtcgacctcgtgatccaggtggaggccccaccgtccgtcgcg gccgggctgcagcgcatcggccgcgccggacaccaggtcggcgaggtgagtcgcggcgtg ctgtttccgaagcaccgcaccgacctgatccactgcacggtggtggcgcagcgaatgctc gccggccgcatcgaggcgctctcggtcccggcaaacccgctcgacatcctcgcccagcag accatcgcggccaccgccgtcgacgatctcgacgtcgacgaatggtacgcgaccgtccgg cgcgcgatgccgtatcggaccctcacccgcgacgtgtacgacgccgtcctcgatctgatc tccggccggtacccgtccgacgaattcgccgaactgcgcccgagggtggactacgaccgc gcagccgggcggctcaccgcccggcgcggcaccctgcgcctggcggtcacctccggcgga accatccccgaccgcgggctgttcggcgtcttcctcgtgggtgggaccgaccgcgcggaa agcagccagccccgccgggtcggagagctcgacgaggagatggtctacgagtcacgggtc ggcgacgtgttcgccctcggcgcgtcgagctggcgaatcgaggagatcacacacgatcgg gtgctggtctcgcccgcgttcggcatgccggggaggctgccgttctggatcggcgacgcc gtcggtcgtccggccgaactcggtgcggcgatcggtgagttcatcgggatcgcaggcgat gcggagaagctcgccgcactcgccgccgaactcgggctcagcgccaacgcagagcgcaac ctgtcggcgctgatcgcccagcagcgcgatgccaccggcgtgctcccgaccgaccgcacc ctcgtactggaacgcttccgcgacgagctcggcgactggcggctggtgctgcactccccc tacggcctgcgggtccacgcaccgtgggccggtgccgtggccgcgcagctctcggcacgt ctcggcatcgacggggccaccactgccaccgacgacggcatcatcgtgcgcctccccgac accgatgacgatccgccgggagccgacgtcttcctcctcgaccccgagcacatcgaagcg gacgtcacacgcgcgctggccgattcgtcgctgttcgcgtcgcggttccgcgagtgcgcc gggcgggcgctgctgcttccgcgccgtgatcccggaaaacgcgccccgctgtggcaacag cggcagcgcagcgcccaactgctggcggtggcgtcgcgtttcggcgacttcccgatcatt ctcgagacggtccgcgaatgtctctccgacgtctacgacctgccctcgctggtggacgtc ctcacccgcatcatgcagcgcaggatgcggatcaccgaggtcgaaacgtccaccccgtcg cccttcgcggcctcgatgctgctcggctacgtcggctcattcatctatgacgacgacgcc ccgctcgccgaacgccgggcgaccgcgctgtccctcgacaccgctttgctcgcccagctc ctcggccgcgtcgacctacgtgagttgctcgatcccgcagtgatcacggaggtcgtcgcg cggctccagcggacggctccggaacggcgtgcgcgcgacgatcaagatgtggtggacctg ctgcggtggctgggaccgtgcacaccccgacagatcgccgaacgctaccggggcgacgac ccactcgccgttccgctcgacgaggtgctcgagcgactcctcgccgacggccgcttgatc gaggtgcccttccgcggcgcgaccgctctggcctcggtcgacgacgcagcgcgactccgc gacggcctcggcataccgctgccgctgggcgtcccggtcgcctatctgcaggctgtcgcc gatcccctggccgacctggtgcaccgttatgcccgcacccacggaccgttcaccaccgcc gatgtcgcggaagctctcggcatggcacccgcggtggtgacgcggaccctcgaagagctc gcggcgcgacgaactgtgatcgagggcgagttcattccgctcccgcccgaaccgcagacc ggccgcaccccgagccagtggtgccattccgacgtcctcacccagctccgccgcggatcg ctggcggccgggcgcgccgaagtggagccggtcagcgccgaggcgtacacccgattcctg ctcggctggcagcacgtcaccgggaagtcacggctgcgcggcgccgccggcgtcgcggcc gtcgtcgaacagctcgccggacagccgataccggcgtcggcgtgggagacgctggtgctg ccggcgcgggtggaggactaccggccgtcgatgctcgatgagctgaccgcctccggcgag gtgatctggtccggacacggggccatcggcggggccgacggctgggtggccctgcatctg gccgacgccgccgcactcaccctccggcccgccgaggacgccgaaccgactcccgctcag gaagcggtccggaccgctctcgaccggggcggggccctgcgcttccgcgaactgtccgac gcgctgaacagcgcagaacacgcgatccccgacggtgaactgcccgacctgctgtgggat ctcgtgtgggccggaatcatcacgaacgactcgttctcggtggtccgcgccgcgctgaac ccgccgcgcagcgcacgatcgtcggccacctccgcccaccggactcgcggtcggccgccg cgtctgcgcgccgcacggctgtcgtcgcagtatctggcgggtgctgcgggtacggcagcc acgccgcccacggtcggggggcgatggtcggtgatccgtcgcatccccgtcgatccgacc actgctgccgctgccacctgcgacgtgcttctcgaccgctacggcgtggtgacgaaggga gccgtgaccgccgaatcgaccgagggcggattcgcgcgaatctacaaggcgctcggcgtc ttcgaggacaacggccaggtgcggcgcgggtactacatcgacgggctgggaggcgcgcag ttcgccgccggccacaccgtcgacatcctgcgcgagtcgactgtcgtctcacgcgaggaa cggtgcgcggcggtggtgctcgcggccaccgatccggcgaatccgtacggcgcggccctc gactggcccgagcgagccgtcgaatcggggcatcggcccggccggaagccgggagcggtc gtgatcctggtgggcggacgcgccgcggtgttcatcgagcgcggcggaaagacggtgctc accttcaccgccgagaccgagctcctcgaggcggccgcggcggcgctgtcgcacgcggtc accaccggggcggtgccgcgcattcacatcgatcaggtcgacggcgagccggtacgccgc acatcgctgggtgagcgactggtcgcctccggcttcgcgaccacgccccggggactgcgg atgaactacgacccgaggagccggtag

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