KEGG   Gordonia sp. YC-JH1: CXX93_16320
Entry
CXX93_16320       CDS       T05256                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
goc  Gordonia sp. YC-JH1
Brite
KEGG Orthology (KO) [BR:goc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:goc02048]
    CXX93_16320
Enzymes [BR:goc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CXX93_16320
Prokaryotic defense system [BR:goc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CXX93_16320
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AUH69599
LinkDB
Position
3524943..3527726
AA seq 927 aa
MPSKALGSDISAAVVGLSDAARSLWAKSDYTEGVEWLPLYQHMADAAAVAGILWDEFLPN
AVKREVAAALGDDADLARRMLVWLAASHDSGKASPAFCVQVEHLRAKAEDAGLPFHPSVC
RNRSALPHSMAGYLVLRDRLTRTHGLGKREAAALAAISLGHHGTFATPPPHYDGGSVELL
GTGTQWETVQRELVAFTETLAGLTTEDFTELGSRLIPQTAAVVATGLTIMADWIASSSDS
FPLRTSPRPAHAATDAMRALRLPPPWSADLPDDNELFAAHLELSAPRPLQTRLVDLTRSI
ERPELIIIEAPTGDGKTKAALGGSEVLAARFGLGGVLFALPTQATSDGIFGTVREWLDLI
QGDDDVSLGLAHGKAQFNSDFQAVPRMSSVFDDSRDGRAVAHWFLTGRNKLATMSDFVVG
TIDQLLLGALCAKHVVLRHLGVAGKVVVLDEVHAADHFMRQYLCRMLTWLAAYGVPVVAM
SATLPPSIRHELVSAYNDGLGRQTPKPANDATYPRLTCTSDSGSTVIAVPSSGRSSRLTI
DELPGNTDEIADAVLTAAMGGGNIAVVCDTVRRAQDLYRLLTDIVPPEVEIDLLHSRFLT
PDRMRKEQRLRERLGPDAERRDGPLIVIATQVIEQSLDIDFDAMFSDIAPIDLLIQRAGR
LHRHGHKDASRPSAHQTPRLRITGFARRDDAAPELDAGCRAVYGKSALLRCIATLDEHFA
RHDVIVSPDHVSGLVSHAYESVTAPPGWETEWEDAEASADEVRAKKAQRARSFLIPAPAK
RPLVGWADQAALASDPTGERSVAQVRDSEDTIEVVVIQRMAGRRIIPEWATEMAGEDVDF
ATVIEDDIARAAAMNTLRLPGFLGSAGIGDALIAELEDNCIDTWQNSRWLRGVLPLVLDR
DGNAEHADHHFHYDDDLGLVVTPLEKL
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgcctagcaaagcactcgggtcggacatttccgccgcggtcgtcggcctctccgacgcc
gcgcggtcgttgtgggccaagtccgactacaccgaaggcgtcgagtggctgccgctctat
cagcacatggccgacgcagccgccgtcgccgggatcctgtgggacgagttccttccgaac
gcagtgaagcgggaggtcgcagcggcgctcggcgacgacgctgacctcgcccgccggatg
ctcgtatggctcgcagcatcacacgattcaggcaaggcgagccccgcgttctgcgtacag
gtagagcacctgcgggcgaaggccgaggacgccggactgcccttccacccgtctgtctgc
cggaaccggtcggccttgcctcactcgatggccggctacctcgtcctgagagatcgtctg
acacgcacacacggtctgggcaagcgggaggctgcagcactggcggccatttccctcggc
caccacggcaccttcgctaccccgccaccccactacgatggcggcagcgtcgaactcctc
ggcaccggcacgcaatgggagacggttcagcgagaactcgtcgcattcactgagaccctc
gccggcctgaccactgaggacttcactgaactcggttcacgcctcatcccccaaacagcg
gcggtcgtcgcgaccgggctcacgatcatggcggactggatcgcctccagttccgactcg
ttccccctgcgtaccagccctcgtcccgcacatgcagcaaccgacgctatgcgcgccctg
aggcttcctccgccgtggtcagccgacctcccggacgacaacgaactattcgccgcccat
ctcgaactttccgcgccgagaccgcttcagactcgcttagtggacctcaccaggtccatc
gaacgtccggaactgatcatcatcgaggcgccgaccggcgacgggaagacgaaggccgcg
ctcggcggaagcgaggtcctcgccgcacggttcgggctcggcggcgtcctgttcgcgctc
ccgacgcaagcgacgtccgacgggatcttcggcaccgtgcgcgaatggctcgatctgatt
caaggcgacgacgatgtctctctcggcctggcccacggaaaggcacagttcaactccgac
ttccaggccgtgccgcgcatgtcctcggtgttcgacgacagtcgagacggccgcgctgtg
gctcactggttcctcaccggccgcaacaagctcgcgaccatgtcggacttcgtcgtcggc
acgatcgatcagcttctgctcggggcactgtgcgccaagcacgtggtgctcagacacctc
ggagtcgcgggaaaggtcgttgtcctcgacgaggtccacgcggccgaccacttcatgcgc
cagtatctgtgccgcatgcttacatggctcgccgcatacggagtgcccgtcgtcgctatg
tcggccactctcccaccgtcgatccgtcacgaattggtcagtgcgtacaacgacgggctc
ggcaggcagactccgaaacccgcaaacgatgccacctatccacggctcacatgcacgtcc
gacagcggatcgacagtgatcgcggtgccctcgtctgggcgcagctcacggttgacgatc
gatgagttgccaggcaatacagacgaaatcgcggacgccgtactcacggcggctatgggc
ggcggcaacatcgccgtcgtctgcgacaccgttcgtcgcgcccaggacctctatcgtctg
ttgaccgacatcgtgccaccggaggttgagatcgacctcttgcactcgcggttcctcact
ccggacaggatgcggaaggagcaacgtctccgagagcggctcggacccgacgccgaacgg
cgcgacggtccgttgatcgtgatcgcgacccaggtcatcgagcagtcgctggatatcgac
ttcgacgccatgttcagcgacatcgcaccgatcgacctcctgatccagcgcgccggtcga
ctgcatcgtcacggtcacaaggacgcctcccgaccgtcggcacatcagaccccacggctt
cggatcaccggattcgcacgcagagacgacgcggcaccggaattggacgccggctgccgg
gccgtctacggcaagtccgcgctgttgcgctgcatcgccacactcgacgagcacttcgcc
cgtcatgacgtgatcgtcagcccggaccatgtctccggtctcgtctcgcacgcatacgaa
tcggtgaccgcaccgcccggatgggagaccgagtgggaggacgccgaggcatctgctgac
gaagtacgcgccaagaaggcacagcgcgcacgctcgttcttgatcccggctccggcgaaa
cgcccgctcgtcggctgggccgatcaagctgcgctcgcatccgatcccacaggcgaacgc
agtgtggcacaggtccgggactcggaggacacgatcgaagttgtcgtgatccaacggatg
gccggccgccgcatcattcccgagtgggcgacggagatggcaggcgaagacgttgatttc
gcaaccgtcatcgaagacgacatcgcgcgcgccgccgcgatgaacactctccgactcccc
ggattcctgggctcggccgggatcggcgacgcactcatcgctgaactcgaagacaactgc
atcgacacctggcagaactcacgctggcttcgaggcgtgctgcccctagttctggaccgc
gatggaaacgccgaacacgccgaccatcacttccactacgacgacgaccttgggctggtc
gtcaccccattggagaaactatga

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