Gordonia sp. YC-JH1: CXX93_17835
Help
Entry
CXX93_17835 CDS
T05256
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXX93_17835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_17835
Enzymes [BR:
goc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CXX93_17835
DNA repair and recombination proteins [BR:
goc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CXX93_17835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Trypsin_2
Motif
Other DBs
NCBI-ProteinID:
AUH69823
LinkDB
All DBs
Position
complement(3848556..3849134)
Genome browser
AA seq
192 aa
AA seq
DB search
MGFTREELLDRIGATVPDLIGSDCRLLIAGINPGLWTAATGAHFARPGNRFYPALHAAGI
TDHVIDASAGMSDDDAAALTDAGIGITNVVARATAKASDLTRDELLRGGRELEATVLRVR
PRVLAILGVTAYRAAFGRRTAVVGRQPESIGGAELWVLPNPSGLNAHETVETLAAAYRRA
ADAAGVRDLRRR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtggggttcacccgagaggaactgctcgaccggatcggtgcgaccgttccggatctgatc
ggctccgactgccggctgctgatcgcgggcatcaatcccgggctgtggaccgcggcgacc
ggggcccacttcgcccggcccggcaatcgcttctatccggcactgcacgccgcgggcatc
accgatcacgtgatcgacgcatcggcggggatgtccgacgacgacgccgcggcgctcacc
gatgccgggatcggcatcaccaatgtcgtcgcgcgggccaccgcgaaagcctccgacctg
actcgggacgagctgctgcgcggcggtcgggaactggaggcgacggtgctccgggtgcgg
ccgcgcgtcctcgcgatcctgggggtcaccgcctatcgcgcggcgttcgggcgccgcacg
gccgtggtgggccggcagccggagtcgatcggcggcgccgagctctgggtactgccgaac
ccgagcgggttgaatgcgcacgagaccgtcgagaccctggcggctgcgtaccggcgggcg
gcggacgcggccggggtacgcgatctgcgtcgccggtga
DBGET
integrated database retrieval system
