Gordonia sp. 135: GKZ92_00930
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Entry
GKZ92_00930 CDS
T06305
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
god
Gordonia sp. 135
Pathway
god00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GKZ92_00930 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
god01007
]
GKZ92_00930 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
god03016
]
GKZ92_00930 (lysX)
Enzymes [BR:
god01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GKZ92_00930 (lysX)
Amino acid related enzymes [BR:
god01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GKZ92_00930 (lysX)
Transfer RNA biogenesis [BR:
god03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GKZ92_00930 (lysX)
Prokaryotic type
Other AARSs
GKZ92_00930 (lysX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
HupE_UreJ_2
Motif
Other DBs
NCBI-ProteinID:
QGP86347
UniProt:
A0A6I5Z6P8
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All DBs
Position
217433..220924
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AA seq
1163 aa
AA seq
DB search
MQICAAAGSNQRGVPSRTRADDYRRRMATDTPLAPVDPSSPDEHPEAPRRTPTAADRRSL
VLLDKIRRPTGFGRNAPHIAGTVVGVLATIALLSSLFPAFRRLIHDPRRYVDDYVITLPD
TSFAWAFVLALIAIALSARKRIAWWISVIYLVLFMVGNVLYLIPALEDDLDVTSWDRTNL
YIGLVIDLAALVFLVATYRQFHTRVRRGAIPAAIATLVVGLGIATLLGWALVWAFPHTLT
RGDRLPYAFNRVVAFGAIDQEASFDGRHAPIFVNGLLGLFGALALIAAAVVLFRSQRLRW
LMTAEDEALIRALITRFNDDDSLAYFSTRRDKAVVFSPDGRAAITYRVEVGVGMAGGDPI
GDPESWPDAITEFLTLCEKYGWHPASIGSSSRGAAAYDAAGFISLNIGDEAILHTREFSL
SGPAMKAVRQAVTRTRRAGVTVRIRRHGDIGDAEMEKVVARADDWRDTDEERGFAMALSR
IGDRADDDCLLVEGVVGEGTPDEQVVGMLSFVPWGRRGASLDLMRRDRQGPNGVVETMVA
ELCRNSEQFGITEVSLNFAAFRAFFEQGPQIGAGPVMRAGYSVLMFGSRFFQMESLYKSN
AKYLPDWQSRYLCFEDNRILPRVGLAAIVTEGFITLPRFGRAKHYSEGQPSIPAGVDAPA
LIAELEAEAATPEGAVVHRPEQVRVRLDKMDRLVERGFDPYPPADQPTHTIAQARTEPEG
TVVTVAGRVTRLRDFGKVVFADMHDWSGEVQILVEESRVIPGTPDFGTDVDLGDLIQVRG
VVGTSRKGELSILIDAWRINGKCLRPLPDKWAGLTDPEARVRQRYVDLAINEESRKNLAI
RSLVVKSLRDFLAARGFLEVETPILQQIHGGANATPFQTHINAYNLDLYLRIAPELYLKR
LCVGGVEKVFEIGRNFRNEGVDFSHNPEFTSLEAYEAHSDYLKMLDLTRELIQHAATAAY
GEPVIIRTDADGNEERVDISGEWPVKTVHEVVSEGAGEEITPETSVEQLRAVCDRLEINY
RPDWDAGQVVLELYEHLGEDRTTFPTFYTDFPTSTSPLTRAHRSKPGVAERWDLVAWGVE
LGTAYTELTDPVEQRKRLTEQSVLAADGDPEAMELDEDFLQALEYAMPPTGGLGVGVDRV
VMLITGQSIRESLAFPLAKPQDA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatgtgccgccgcaggatccaatcagcgtggagtgccgagtcgcacccgtgcg
gacgactaccgtcgacgcatggccaccgacaccccccttgcgccggtcgacccgtccagc
cccgacgaacatcccgaggcaccccggcggacccccaccgcggctgaccggcgctccctc
gtcctcctcgacaagatcaggcgccctaccggattcggccgcaacgccccgcacatcgcg
ggcaccgtcgtcggtgtcctggcgacgatcgcgttgctgtccagcctgttcccggccttt
cgtcgtctgattcacgaccctcggcgttacgtcgacgactacgtcatcacgctgcccgac
acgagttttgcgtgggctttcgtcttggcgctgatcgcgatcgcgttgtcggcacgcaag
cggatcgcctggtggatcagcgtgatctatctggtgctcttcatggtgggcaacgtgctc
tatctgatcccggcgctcgaggacgacctcgacgtgacgtcgtgggatcggacgaacctc
tacatcggcctggtcatcgacctcgccgcgttggtcttcctcgtggcgacctaccggcag
ttccacaccagggtgcgccggggtgcgattcccgcggcgatcgccacgctggtcgtcggt
ctcggcatcgcgacattgctcggctgggcgctggtctgggccttccctcacacgctgacg
cgcggcgatcgccttccgtacgcgttcaaccgtgtggtcgccttcggcgcgatcgaccag
gaggcgtccttcgacggtcgccacgccccgatcttcgtgaacggcctgctgggtctgttc
ggtgcgctcgcgctgatcgccgcggcggtcgtactgttccggtcgcaacgactgcgctgg
ttgatgaccgcggaggacgaagcgctcatccgtgcgctcatcacccgcttcaacgacgac
gattcgctggcctacttctccacccgtcgggacaaggcggtcgtgttctcgcccgacggc
cgggcggcgatcacctaccgggtcgaggtcggcgtcggaatggccggcggtgacccgatc
ggcgatccggagtcgtggcccgacgccatcacggagttcctcaccctctgtgagaaatac
gggtggcatccggcttccatcgggtcgagttcacgcggcgccgcggcctacgacgccgcc
ggcttcatctcgctgaacatcggtgacgaagccatcctgcacacccgtgagttcagcctg
agcgggccggcgatgaaggccgtgcgccaggccgtcacccgcacgcggcgcgccggtgtg
accgtccggatccgacgccacggcgacatcggcgatgccgagatggagaaggtcgtcgcc
cgcgccgacgactggcgcgacaccgacgaggagcgcggtttcgcgatggcgttgtcgcgc
atcggcgatcgcgccgacgacgactgcttgctggtcgagggcgtggtcggcgagggcacc
ccggacgagcaggtcgtcggcatgctctcgttcgttccctggggtcgccgcggcgcctcc
ctggacctgatgcgacgcgatcggcagggaccgaacggcgtcgtcgagacgatggtggcc
gaattgtgccgcaactccgaacagttcggcatcaccgaggtctcgctcaacttcgcggcc
ttccgcgcgttcttcgagcagggcccgcagatcggtgcgggcccggtcatgcgcgccggc
tactccgtactgatgttcggctcgcggttcttccagatggagtcgctgtacaagtcgaac
gccaagtacctaccggactggcagtcgcggtatctgtgcttcgaggacaaccgcatcctg
ccgcgcgtcggactcgccgcgatcgtcaccgaagggttcatcaccctgcccaggttcggg
cgggccaagcactattccgaaggccagccgtcgattccggccggcgtcgacgcgcctgcg
ctgatcgccgaactggaagccgaggcagcaactcccgagggtgccgtcgtgcaccgtccc
gagcaggtgcgggtccgactcgacaagatggaccggctcgtcgagcgtggtttcgatccc
tatccgcccgccgaccagccgacgcacaccatcgcgcaggcgcggacggaacccgagggc
accgtcgtcaccgtcgccggccgcgtcacgcgtctacgtgacttcggcaaggtggtgttc
gccgacatgcacgactggtcgggcgaggtgcagatcctcgtcgaggagtcgcgggtcatc
ccgggcactcccgacttcggtaccgacgtcgacctcggtgacctgatccaggtgcgcggt
gtcgtcggcaccagtcgcaagggcgaattgtcgatcctgatcgacgcctggcggatcaac
ggcaagtgcctgcgaccactgccggacaagtgggcgggcctcaccgatcccgaggcccgc
gtgcgccagcgctacgtcgatctcgcgatcaacgaggagagccggaagaacctcgcgatc
cgcagtctggtggtgaagtcgttgcgcgacttcctcgccgcgcgcggtttcctcgaggtc
gagacgccgatcctgcagcagatccacggcggcgccaacgcgacaccgttccagacgcac
atcaacgcctacaacctcgacctctatctccggatcgcgccggagctctacctcaagcgc
ctgtgtgtcggcggcgtggagaaggtcttcgagatcggacgcaacttccgcaacgagggc
gtcgacttcagccacaaccctgagttcacgagcctggaagcctatgaggcgcacagcgac
tacctcaagatgctggacctcacccgcgagctgatccagcacgcggcgacggcggcctac
ggcgaaccggtgatcatccgcaccgacgccgacggaaacgaagagcgcgtggacatctcg
ggcgagtggccggtgaagaccgtccacgaggtggtgtccgagggggcgggcgaggagatc
acgccggagacgtcggtcgagcagctccgggcggtgtgcgatcgcctcgagatcaactac
cgcccggactgggacgccggacaggtcgtgctcgaactctacgaacacctcggcgaggac
cgcacgacgttcccgacgttctacaccgacttcccgacgtcgacgtcgccgctgacccgc
gcacaccgcagcaagcccggcgtcgccgagcgctgggatctggtggcgtggggagtggag
ctcggcactgcgtacaccgagctgaccgacccggtggagcagcgcaagcgtctcaccgag
cagtccgtcctggccgccgacggcgacccggaggcgatggagctcgacgaggacttcctg
caggcgctcgagtacgcgatgccgccgacaggtggtctgggcgtcggcgtcgaccgcgtg
gtcatgctcatcaccggccagtcgatccgcgaatcgctggcgttcccgctggccaaaccg
caggacgcgtga
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