Gordonia sp. 135: GKZ92_04205
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Entry
GKZ92_04205 CDS
T06305
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
god
Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:
god00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
god03400
]
GKZ92_04205 (radA)
DNA repair and recombination proteins [BR:
god03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKZ92_04205 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DUF7125
DnaB_C
Lon_C
AAA_22
AAA_16
GvpD_P-loop
AAA_30
AAA
AAA_19
NACHT
DUF7129
RecA_N
nSTAND3
nSTAND_NTPase5
ABC_tran
AAA_14
AAA_29
NTPase_1
DAP3
Zn_ribbon_8
RsgA_GTPase
AAA_5
NPHP3_N
TsaE
DZR
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QGP86928
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Position
complement(910203..911582)
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AA seq
459 aa
AA seq
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MAKPKSSYRCTGCGHQVAKWVGRCPECSEWGSIDEVAGAPTSSRTTAAVAPSSPALRITE
VDAQSTAAVPTGIGELDRVLGRGVVPGSVILLAGEPGVGKSTLLLETVKHWAAQDRVALY
ITGEESAGQVRMRAERTGAVHANVYLAAETDLATILGHVDTVRPSLMIIDSVQTVVASGA
DGVTGGVTQIRAVTTALVSLAKDRGIAVILVGHVTKEGAVAGPRSLEHLVDVVLAFEGDK
HSTLRMVRGVKNRFGAADEVGCFEQRDDGIHQVPDPSGIFLHQRDSDVSGSVTMVTMDGK
RALVGEVQALANGTEMSNPRRAVSGLDFNRVAMVLAVLQARAGRKELGKSEVYLSTVGGM
RVTEPAADLAIALSVYSTLTQRPVPQSTVVIGEVGLGGEIRRVSAVARRLAEAKRLGFRE
AIIPAATDEELPKGIRILRVANLGDAVHLRDSDPVDAPF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacccaaatcctcgtatcgctgcaccggctgcggtcatcaggtcgccaagtgg
gtcggacgctgccccgaatgcagcgagtggggatcgatcgacgaggtcgccggcgcaccc
acgtcctcccggacgaccgccgcggtggcgccgtcgagcccggccctgcgcatcaccgag
gtcgacgcccagtccaccgcggcggtgcccaccggcatcggggaactcgaccgcgtcctc
gggcgcggcgtcgtcccggggtcggtcatcctgctcgccggagaacccggcgtcggcaag
tcgacgctgctgctggagaccgtcaaacactgggcggcccaggatcgcgtcgcgctctac
atcaccggcgaggaatcggccggtcaggtccgtatgcgcgccgagcgcaccggcgcggtg
cacgccaacgtctacctcgccgccgaaaccgatctcgcgaccatcctcggccacgtcgac
accgtgcggccgtcgctgatgatcatcgactcggtgcagaccgtcgtcgcgtccggcgcc
gacggcgtgaccggtggcgtgacgcagatccgcgccgtcaccaccgcactggtctcgctg
gccaaggaccggggcatcgcggtgatcctggtcggccacgtgaccaaggagggcgcggtc
gcgggtcctcgttcactcgagcacctcgtcgacgtcgtactcgccttcgagggcgacaag
cactcgacgctgcggatggtccgcggcgtgaagaaccgattcggcgccgccgacgaggtc
ggctgtttcgaacagcgcgacgacggcatccaccaggtgcccgatccgtcgggaatcttc
ctgcaccaacgggattcggacgtcagtggcagcgtcacgatggtgacgatggacggcaag
cgggcgctcgtcggcgaggtacaggcgctcgccaacgggaccgagatgtccaacccccgt
cgtgcggtgtcgggcctcgacttcaaccgggtggcgatggtcctcgccgtgttgcaggcg
cgcgccggccgcaaggaactgggcaagtcggaggtctacctgtcgacggtcggcggcatg
cgcgtgaccgaacccgccgccgacctcgccatcgcgctctcggtctattcgaccctgacc
caacgccccgtcccccagtcgaccgtcgtcatcggcgaagtcggactcggcggcgagatc
cgtcgggtgtcggcggtggcgcgacgcctggcggaggccaagcggctcggcttccgcgag
gccatcatccccgcggccaccgacgaggaacttccgaagggcatccgcatcctccgggtc
gccaacctcggcgacgccgtccacctccgcgactccgacccggtggacgcgccgttctga
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