Gordonia sp. 135: GKZ92_06475
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Entry
GKZ92_06475 CDS
T06305
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
god
Gordonia sp. 135
Pathway
god03420
Nucleotide excision repair
god03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKZ92_06475
03430 Mismatch repair
GKZ92_06475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
god03400
]
GKZ92_06475
Enzymes [BR:
god01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKZ92_06475
DNA repair and recombination proteins [BR:
god03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKZ92_06475
MMR (mismatch excision repair)
Other MMR factors
GKZ92_06475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
PcrA_UvrD_tudor
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
QGP87315
UniProt:
A0A6I5Z949
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All DBs
Position
1410793..1413303
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AA seq
836 aa
AA seq
DB search
MNSSSSAPLLAGRTSSSSSGTTAADDRVARLLEGLNPQQRAAVLHAGAPLLIVAGAGSGK
TSVLTRRIAYLLAARDVTPGQILAITFTNKAAAEMRERVIDLVGPRAAYMWVSTFHSTCV
RILRAQSGLLEGMNSNFSIYDADDSKRLLGMIIRDLDLDPKKFSPRGVSVAISNFKNELI
SPDAAAASVNEDDFTAATIAKIFAEYQRRLRAANAFDFDDLIGETVALLHRHPQVAEYYR
RRFRHVLVDEYQDTNHAQYVLIRELVGEQTTASGLEPSELCVVGDADQSIYAFRGATIRN
IEEFERDFTNAETVLLEQNYRSTQTILSAANAVIARNTGRREKKLWTDSGDGELIVGYVA
DSDREESTFIAKEIEELTDYSIGGSSSYKYSDIAVFYRTNTGSRAIEEVFVRHGIPYKVV
GGTKFYERKEVRDVVAYLRVVANPDDSVSLRRILNTPRRGIGDRAEACVAVHSENTGRSF
YESLVDAAEGKVALLNTRAVKQIGGFVELIEGLRADFLTHFGESDTDDADTAFLDATEES
ADIGELVDAIVERTGYRSELEASNDPQDGARLDNINELVAVAREFSADAAQVDLEADDDP
SIEVDREGEPEPGSLAAFLERVSLVADADQVPDEGDDVVTMMTLHTAKGLEFPVVFVTGW
EDGHFPHMRALGDPNELSEERRLAYVGITRAKQRLYLTRSVTRASWGQPVSNPESRFLPE
IPQHLIDWRRTEPRRSVRGFGGSSGGVFGRDDSFSGSGGGSSFGRGRSSYSSDPARGRNK
QVHLDIGDRHNHPKYGMGKVVAKEGSGATERVTIDYGGSAGRVTLLTAGGIPGEKL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctcttcttctgcccctctcctcgccggtcgcacgtcttcctcgtcttcgggg
acgactgccgccgacgaccgtgtcgcccgcctgctcgagggcctcaacccgcagcagcgc
gccgcggtcctccacgcgggcgcgccgctgctgatcgtcgccggcgcgggttcgggcaag
acctcggtcctgactcgccgcatcgcctacctgctggcggcccgcgacgtgacgcccggg
cagatcctggccatcaccttcaccaacaaggccgccgccgagatgcgcgagcgcgtcatc
gacctggtcgggccgcgggccgcctacatgtgggtctcgaccttccactcgacgtgcgtc
cgcatcctgcgggcgcagtcgggcctgctggaggggatgaactccaacttctccatctac
gacgccgacgactcgaagcggttgttgggcatgatcatccgcgacctcgacctggacccg
aagaagttcagtccgcgcggcgtctcggtggccatctcgaacttcaagaacgagctgatc
tcgcccgacgcggccgcggcctcggtaaacgaggacgacttcaccgcggcgacgatcgcg
aagatcttcgccgagtaccagcgccggctgcgggcggccaacgccttcgacttcgacgac
ctgatcggcgagaccgtcgcgttgctgcaccgtcacccgcaggtcgccgagtactatcgg
cgccgcttccggcacgtcctcgtcgacgagtaccaggacaccaaccacgcccagtacgtc
ctcatccgcgaactggtgggggagcagaccaccgcgagcggcctcgaaccctccgaactg
tgcgtcgtcggtgacgccgatcagtcgatctacgccttccgcggcgccaccatccgcaac
atcgaagagttcgagcgtgacttcacgaacgccgaaacagttctgctcgaacagaactac
cgctcgacgcagacgatcctgtcggctgccaacgcggtcatcgcgcgcaacaccggccgt
cgcgagaagaagctctggaccgactccggcgacggcgagctcatcgtcggctatgtcgcc
gactccgatcgtgaggagtcgacgttcatcgccaaggagatcgaggaactcaccgactac
tcgatcggcgggtcatcgagctacaagtactccgacatcgcggtcttctaccgcaccaac
accggctcccgtgcgatcgaggaggtgttcgtccgccacggcatcccctacaaggtggtc
ggcggcaccaagttctatgagcgcaaagaggtccgggacgtggtcgcctacctgcgggtg
gtcgccaaccccgacgactcggtgagcctgcggcgcatcctcaacaccccccgacgcgga
atcggcgatcgcgccgaggcctgtgtcgccgtgcattcggagaacaccggccgcagcttc
tacgagtcgctcgtcgacgccgccgagggcaaggtcgcgctactgaacacacgcgcggtc
aagcagatcggcggcttcgtcgaactcatcgagggcctgcgcgccgacttcctcacgcac
ttcggcgaatccgacaccgacgacgccgacaccgccttcctcgacgccaccgaggagtcc
gccgacatcggtgaactcgtcgacgcgatcgtcgaacgcaccggttaccggtccgagctg
gaggcgtcgaacgatccccaggacggcgcccggctcgacaacatcaacgaactcgtcgcc
gtcgcacgggagttcagcgccgatgccgcccaggtcgatctggaggcggacgatgatccg
tccatcgaggtggaccgcgagggtgaacccgaacccggttctcttgcagcatttctcgag
cgggtctcgctggtcgccgatgccgaccaggtgcccgacgagggtgacgacgtcgtcacg
atgatgacgctgcacaccgcgaagggcctggagttcccggtcgtgttcgtgacaggctgg
gaggacgggcatttcccgcacatgcgtgcactcggtgacccgaacgaactgagtgaggaa
cgccgcctcgcctacgtgggcatcacccgcgccaagcagcgtctgtacctgacccgatcg
gtgacccgtgcatcatgggggcagccggtgtcgaatccggaatcccgcttcctgccggag
atcccgcagcacctgatcgactggcggcgcaccgagccgcgtcgttcggtacgtggcttc
ggcggatcgtcgggcggcgtgttcggtcgcgacgactcgttctcgggcagtggcggcggt
tcgtcgttcggtcgcggccggtcgtcgtactcctccgacccggcccgcggacgcaacaag
caggtccacctcgacatcggcgaccggcacaaccatcccaagtacggcatgggcaaggtc
gtggccaaggagggcagtggcgccaccgaacgcgtcaccatcgactacggcggcagtgcc
ggacgcgtcaccttgctgaccgcaggtggcatcccgggagaaaagctctga
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