Gordonia sp. 135: GKZ92_06550
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Entry
GKZ92_06550 CDS
T06305
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
god
Gordonia sp. 135
Pathway
god00061
Fatty acid biosynthesis
god00071
Fatty acid degradation
god01100
Metabolic pathways
god01212
Fatty acid metabolism
god02024
Quorum sensing
god04146
Peroxisome
Module
god_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
god00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GKZ92_06550
00071 Fatty acid degradation
GKZ92_06550
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GKZ92_06550
09145 Cellular community - prokaryotes
02024 Quorum sensing
GKZ92_06550
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
god01004
]
GKZ92_06550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
god04147
]
GKZ92_06550
Enzymes [BR:
god01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GKZ92_06550
Lipid biosynthesis proteins [BR:
god01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GKZ92_06550
Exosome [BR:
god04147
]
Exosomal proteins
Exosomal proteins of breast milk
GKZ92_06550
Exosomal proteins of breast cancer cells
GKZ92_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QGP87329
UniProt:
A0A6I5ZB27
LinkDB
All DBs
Position
complement(1425246..1426877)
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AA seq
543 aa
AA seq
DB search
MNAYESRPWLAHYPSGLSEHLDVEFGSPLEMFDAAIAASPDAPAVHYFGATLSWADLDAA
SDALAHALQEHGFAVGDLLGIAVQNEPAIVLGLLAAWKVGGVAALISPMYKRGEFRRALD
DFTPAALLVLDEVHAEVADELGSIGLVVTASPLDFAGSDDLQRVFDVSRVSTAGTVELLD
LIGTGSRAVTRHAPAPDDVAVLAPTSGTTGPPKGAKLTHRNLTFSAQAYRTWTGLQSGEP
ILCMSPIFHVTGLVGSVMLALSLRSPLILTHRFDAGLVLDAVRAWRPAFSVASITAYIAL
ADHPEATPEAFDSLRLRYSGGAPVLPDVAERIEERLGGMIHNVYGQTESTSPTHMVPPGV
LAPVDAETGALSVGLPIFDTMARVVDERGEPVPPGTFGEIVTAGPQIAAGYWGQDDDGSA
LRHGEMRTGDVGFMDADGWFYVIDRSNDLINASGYKIWPFEIEQVLQSHPAVLETAVVGI
PDDYRGESTRAYVALQPGAEVTPTELIEYCRERMAAYKYPREVEIVGALPRSATGKLLRR
ELR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctacgagagccgtccctggctggcccactacccgtccggactctccgagcac
ctcgacgtcgagttcggatccccactcgagatgttcgacgccgcgatcgccgcatccccc
gacgctccggccgtccactacttcggcgcgacgctgagctgggccgacctcgacgccgca
tccgacgccctcgcccacgcattgcaggaacacggcttcgcggtcggcgacctgctgggc
atcgccgtccagaacgagcccgcgatcgtgctcgggctcctcgcggcctggaaggtcggc
ggtgtcgccgccctcatcagccccatgtacaagcgcggcgaattccgcagggccctggac
gatttcactccggccgccctcctcgtgctcgacgaggtccacgcggaggtcgccgacgag
ctcgggtcgatcggactcgtcgtcacggcctcgccgctcgacttcgccggcagcgacgat
ctgcagcgcgtgttcgacgtgtcccgggtttccacggcaggcaccgtcgaactcctcgac
ctgatcggcaccggctcgcgtgcggtcacccggcacgcacccgcaccggatgatgtcgcg
gtgctggcgccgacgtcgggaaccaccggtccacccaagggcgccaagctgacgcaccgc
aatctgacgttcagcgcgcaggcctatcgcacctggacgggcctgcaatccggcgagccg
atcctgtgcatgtcgccgatcttccacgtcaccggcctggtgggctcggtgatgctggcg
ctgtccctgcgctcgccgctcatcctcacccaccgattcgacgccggcctggtcctcgac
gcggtgcgcgcctggcgtccggccttctccgtcgcctcgatcaccgcctacatcgcgctc
gccgaccaccccgaagcgacgcccgaggcgttcgactcactccgactccgctactcgggc
ggcgcaccggttctccccgacgtcgccgaacggatcgaagaacgcctcggcgggatgatc
cacaacgtgtacgggcagaccgagtccacctcgccgacccacatggtgccgcccggtgtc
ctcgcaccggtcgatgccgaaaccggcgctctctcagtgggtctgccgatcttcgacacg
atggcgcgcgtcgtcgacgagcgcggcgaaccggtaccgccggggacgttcggcgagatc
gtcacggccggaccgcagatcgccgccggctactggggtcaggacgacgacggctcggcg
ctgcgccacggtgagatgcgcaccggcgacgtcggtttcatggatgccgacggctggttc
tacgtcatcgaccgcagcaacgacctgatcaacgcgtccgggtacaagatctggccgttc
gagatcgagcaggtgttgcagtcgcacccggcggtgctcgagacggccgtggtcggcatc
cccgacgactaccgcggtgagtcgactcgcgcctacgtcgccctgcaaccgggtgcggag
gtcacgccgaccgaactcatcgagtactgccgcgaacggatggcggcgtacaagtacccg
cgcgaggtcgagatcgtcggcgcactcccgcgcagcgcgaccggcaagctgttgcgccgc
gaactgcgctga
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