Gordonia sp. 135: GKZ92_08285
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Entry
GKZ92_08285 CDS
T06305
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
god
Gordonia sp. 135
Pathway
god00020
Citrate cycle (TCA cycle)
god00190
Oxidative phosphorylation
god00650
Butanoate metabolism
god00720
Other carbon fixation pathways
god01100
Metabolic pathways
god01110
Biosynthesis of secondary metabolites
god01120
Microbial metabolism in diverse environments
god01200
Carbon metabolism
Module
god_M00009
Citrate cycle (TCA cycle, Krebs cycle)
god_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
god_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
god00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GKZ92_08285 (sdhB)
00650 Butanoate metabolism
GKZ92_08285 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
GKZ92_08285 (sdhB)
00720 Other carbon fixation pathways
GKZ92_08285 (sdhB)
Enzymes [BR:
god01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GKZ92_08285 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_7
Fer4_18
Fer4_2
Fer4
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
QGP87638
LinkDB
All DBs
Position
complement(1803791..1804579)
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AA seq
262 aa
AA seq
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MTSVLDKPAPSSDEPPLPPVPEEATMVTLKIARFNPENPDAQGWESFRVPALPTDRLLNL
LLYVKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKLLMKDMLPKDKSKEITITIEP
IRGLPVEKDLVVDMEPFFDAYRAIKPFLMTTGNEPTRERIQSQSDRARFDDTTKCILCAC
CTTSCPVFWTEGSYFGPAAIVNAHRFIFDSRDEGAVERLDILNDVDGVWRCRTTFNCTDA
CPRGIQVTQAISEVKRALMFSR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgttctggacaagcccgcaccgtcctccgacgagccgccgctgcccccggtg
cccgaagaggccaccatggtgacgctcaagatcgcccggttcaacccggagaatccggat
gcccagggctgggagagcttccgcgtcccggcgctcccgacggaccgcctgctcaacctg
ctgctgtacgtgaagggctacctcgacggcaccctgaccttccgccgcagctgcgcgcac
ggcgtgtgcggctcggacgccatgcgcatcaacggcgtcaaccgtctcgcctgcaagctc
ctcatgaaggacatgctccccaaggacaagtccaaggagatcaccatcaccatcgagccg
atccgcggcttgccggtggagaaggatctcgtggtcgacatggagccgttcttcgacgcc
taccgcgccatcaagccgttcctgatgaccacgggcaacgagccgacccgcgagcgcatc
cagagccagagcgaccgcgcccgcttcgacgacaccaccaagtgcatcctctgtgcctgc
tgcaccacgagctgcccggtgttctggaccgagggttcctacttcggcccggccgcgatc
gtcaacgcgcaccgcttcatcttcgacagccgtgacgagggcgccgtcgagcgtctcgac
atcctcaacgacgtcgacggcgtgtggcgctgccgcacgaccttcaactgcaccgacgca
tgcccccgcggcatccaggtcacgcaggcgatctcggaggtcaagcgcgcactcatgttc
tcgcgctaa
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