Gordonia sp. 135: GKZ92_09265
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Entry
GKZ92_09265 CDS
T06305
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
god
Gordonia sp. 135
Pathway
god00061
Fatty acid biosynthesis
god00071
Fatty acid degradation
god01100
Metabolic pathways
god01212
Fatty acid metabolism
god02024
Quorum sensing
god04146
Peroxisome
Module
god_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
god00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GKZ92_09265
00071 Fatty acid degradation
GKZ92_09265
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GKZ92_09265
09145 Cellular community - prokaryotes
02024 Quorum sensing
GKZ92_09265
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
god01004
]
GKZ92_09265
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
god04147
]
GKZ92_09265
Enzymes [BR:
god01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GKZ92_09265
Lipid biosynthesis proteins [BR:
god01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GKZ92_09265
Exosome [BR:
god04147
]
Exosomal proteins
Exosomal proteins of breast milk
GKZ92_09265
Exosomal proteins of breast cancer cells
GKZ92_09265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QGP87815
UniProt:
A0A6I5ZDH1
LinkDB
All DBs
Position
complement(2022270..2024057)
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AA seq
595 aa
AA seq
DB search
MQQQYATPSDLTIDDKANLVDSILKYRTERPTMPLFRKRSHNQWINVTAKHFADEVDAVA
KGLIASGVEPGDRVAILASTRYEWTVLDYAIWRAGACTVAIYETSAPDQVQWILEDSAAK
LLIVENHEHYTKHIRVIDETPTLKETLVIDDHAFPTLTKRGATVADDELDRRHANSLSTD
AATLIYTSGTTGRPKGVLLTHANFMAECAATRDAVGAGLAEGKTTLLFLPLAHVLARIIA
VASVENGVILGHTNDITNLVNDFAVFKPHYVLSVPRVFEKVYNSAKQKAYDGGKGSIFEK
ATDTAIEYSKAMESGKVGLGLKLRHALFDKLVYGKLRAALGGQCEGAISGGAPLGARLGH
FFRGVGIPVYEGYGLSETTAAVTANNEENQKVGSVGRPVPGVTVAIADDGEILLKGPVVF
SGYWRNEAATADAIRDGWFHTGDIGTLDDGYLFITGRKKELIVTAGGKNVSPAQLEDSIR
AHPMVSQCLVVGDNKPFIAALITIDPEAVPGWLERHNLPADTPLSELIENEDLKAEIDAA
VKEANSKVSNAEAIKKFTILDTDFSIETGELTPTLKLKRNVIHDAHKQAIADLYT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcagtacgccaccccgtccgatctcacgatcgacgacaaggcgaacctcgtc
gactcgatcctcaagtatcggaccgagcgacccacgatgcctcttttccgcaagcgctcc
cacaatcagtggatcaacgtcacggcgaagcacttcgcggacgaggtcgacgcggtggcc
aagggactcatcgcctcgggcgtggagcccggggaccgcgtggcgatcctggcgtcgacg
cggtacgagtggaccgtcctcgactacgccatctggcgtgcaggggcatgcaccgtcgcc
atctacgagacctcggcccccgaccaggtgcagtggatcctcgaggattcggcggccaag
ctcctcatcgtcgagaaccacgagcactacaccaagcacatccgggtgatcgacgagacg
ccgacgctcaaggagaccctggtcatcgatgaccacgcattcccgacgctgaccaagcgc
ggcgcgaccgtcgccgacgacgagctcgatcgccgccatgcgaactcgctgtccaccgat
gccgcgaccctgatctacacctcgggaaccaccggccgcccgaagggtgtcctgctcacc
cacgccaacttcatggccgagtgtgccgccacccgcgatgcggtcggcgccggcctggcc
gagggcaagaccaccctcctgttcctgccgctcgcgcacgtcttggcgcgcatcatcgcg
gtggccagcgtggagaacggggtcatcctgggtcacaccaacgacatcacgaacctcgtc
aacgacttcgcggtgttcaagccgcactacgtgctgtcggtgccgcgcgtgttcgagaag
gtctacaactcggccaagcagaaggcctacgacggcggcaagggctcgatcttcgagaag
gccaccgataccgccatcgagtacagcaaggccatggagagcggcaaggtcggcctcggt
ctgaagctccgccacgcgctgttcgacaagctggtctacggcaagctccgcgccgccctc
ggcgggcagtgtgagggtgcgatctccggcggagccccgctcggcgcccggctcggccac
ttcttccgcggtgtcggcatccccgtctacgagggttacggcctgtcggagaccaccgcg
gcggtcaccgccaacaacgaggagaaccagaaggtcggttcggtcggacgccccgttccc
ggtgtgaccgtcgcgatcgccgacgacggcgagatcctgctcaagggacccgtggtcttc
agcggctactggcgcaacgaggccgcgaccgcggatgcgatccgcgacggctggttccac
accggtgacatcggcaccctcgacgacggctacctcttcatcaccggccgcaagaaggaa
ctgatcgtgaccgcgggcggcaagaacgtctcccccgctcagctcgaggactcgatccgc
gcccatccgatggtcagccagtgcctggtggtcggcgacaacaagccgttcatcgccgcg
ctgatcaccatcgaccccgaggccgtgccgggctggctggagcgtcacaacctgcccgcc
gacaccccgctctcggagctgatcgagaacgaggatctcaaggccgagatcgacgcggcg
gtcaaggaggccaactcgaaggtctccaacgccgaggcgatcaagaagttcaccatcctc
gacaccgacttctcgatcgagaccggtgagctgacgccgacgctgaagctcaagcgcaac
gtcatccacgacgcgcacaagcaggcgatcgccgacctctacacatag
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