Gordonia sp. 135: GKZ92_09845
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Entry
GKZ92_09845 CDS
T06305
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
god
Gordonia sp. 135
Pathway
god03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
GKZ92_09845 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
god03011
]
GKZ92_09845 (rpsA)
Ribosome [BR:
god03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
GKZ92_09845 (rpsA)
Bacteria
GKZ92_09845 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF2110
RNase_II_C_S1
EFTUD2
Motif
Other DBs
NCBI-ProteinID:
QGP87920
LinkDB
All DBs
Position
2156504..2157973
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AA seq
489 aa
AA seq
DB search
MSSPTITSPQVAINDIGTAEDFLAAIDSTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE
GVIPSRELSIKHDVDPNEVVNVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK
EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYIGKEIEAKIIELDKNR
NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPSEVVAVGDEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK
VTKLVPFGAFVRVDEGIEGLVHISELAERHVEVPDQVVAVNDDAMVKVIDIDLERRRISL
SLKQANEDYTEEFDPSKYGMADSYDEQGNYIFPEGFDAETNEWLEGYEKQREAWEARYAE
AERRHKMHTAQMEKFAAAAAEAANAPTDYSSASESRGGSANTSGASSTGGSLASDEQLAA
LREKLSGNA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcccccacgatcacctcgccgcaagtagccatcaatgacattggcactgccgag
gactttctcgccgccatcgactccacgatcaagtacttcaacgatggcgacatcgtggaa
ggcaccatcgtcaaggtcgatcgggacgaggttctgctcgacatcggttacaagaccgaa
ggcgtcattccctctcgcgaactgtcgatcaagcacgatgttgaccccaacgaggtcgtc
aacgtcggtgacgaggtcgaggccctggtcctcaccaaggaggacaaagaaggccgtctg
atcctctccaagaagcgtgcgcagtacgagcgggcttggggcaccatcgaggagctcaag
gagaaggacgaggccgtcaagggcaccgtcatcgaggtcgtcaagggcggcctgatcctg
gacatcggcctgcgcggcttcctcccggcatcgctcgtggagatgcgtcgcgtccgcgac
ctccagccgtacatcggcaaggagatcgaggccaagatcatcgagctcgacaagaaccgc
aacaacgtggtcctgtcgcgtcgtgcgtggctcgagcagacccagtccgaggtccgcagc
gagttcctgcaccagctgcagaagggccaggtccgcaagggcgtcgtgtcctcgatcgtc
aacttcggtgcgttcgtcgatctcggcggcgtcgacggtctggtccacgtctccgagctg
tcctggaagcacatcgatcacccgtccgaggtcgtcgcagtgggcgacgaggtcaccgtc
gaggtcctcgacgtcgatctggaccgcgagcgtgtttcgctgtcgctcaaggccactcag
gaagacccgtggcgtcagttcgcccgtacccatgcgatcggtcagatcgtcccgggcaag
gtcaccaagctggtgccgttcggtgcgttcgtccgcgtcgacgagggcatcgagggtctg
gtccacatctccgagctggccgagcgccacgtcgaggtgccggatcaggttgtcgccgtc
aacgacgatgcgatggtcaaggtcatcgacatcgacctcgagcgtcgtcgtatctcgctg
agcctcaagcaggccaacgaggactacaccgaggagttcgacccctcgaagtacggcatg
gccgacagctacgacgagcagggcaactacatcttccccgagggcttcgacgccgagacc
aacgaatggctcgaaggctacgagaagcagcgtgaggcatgggaggcccggtacgccgag
gccgagcgtcgccacaagatgcacaccgcccagatggagaagttcgccgccgccgcagcc
gaggctgccaacgccccgaccgactactcgtcggcttcggagagccgtggtggctcggcg
aacaccagtggtgcttcgtccaccggtggttcgctggcgagcgacgagcagctcgccgct
ctgcgcgagaagctctcgggcaacgcctga
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