Gordonia sp. 135: GKZ92_12350
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Entry
GKZ92_12350 CDS
T06305
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
god
Gordonia sp. 135
Pathway
god03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GKZ92_12350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
god03400
]
GKZ92_12350
Enzymes [BR:
god01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GKZ92_12350
DNA repair and recombination proteins [BR:
god03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GKZ92_12350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
QGP88357
LinkDB
All DBs
Position
complement(2748770..2750737)
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AA seq
655 aa
AA seq
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MARVLPILGLAHLDRPFDYLIDSDQDATAVPGVRVRVRFSGRLVDGFLLDRIEKSDHPGK
LGWLDRVVSAEPVLSPELASLCRAVADRYAGTMGDVVRLAIPPRHARTEKETTPEPTTVV
EAPDLEAWRRYPLAGSFFEAIAGDGHPRAAWQALPGEDWPRRLAELAAATLAAGRGCIIV
VPDQRDLDRVWAECEPLIGDQGVALAAGLGPTARYRRWLAARRGAAKLVIGTRSAVFAPV
TDLGLVVVWDDGDDSMADPRAPYPHPREVAVLRSHQERCALVLGGFARTAEAQALVASGW
AHDLVADRPLVRHRSPRVQAISDDDRQIARDPMARSARIPEVAFDAARSAFAADQPVVFS
VPRRGYVPSLACTRCREHARCRGCNGPLQMDGNQRLSCRWCGRPEPTFRCPECGNTKVRA
TVTGARRTAEELGRAFAGVPVHTSGGDSIIDEIEPGARLVVATPGAEPVAPDGYGAAIVV
DTWAQLDRADLRAEEHAVRRWMALAGMVRPHGEGGRVVIVADSTLAPVQALIRWDPVGFA
SIQLSERVELGFPPAVTMASVDGPTQVITDFVEHLELPEGSDVLGPVPLPPGVRPPAGSA
EWEAAADDEMDRILVRLPRKHGRLLAQALAAGQARRNTHRQTGPIRVQVDPPTIG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgtgtgctgcccattctcggactcgcacacctcgaccgaccgttcgactacctg
atcgactccgatcaggatgcgacggcggttccgggggtgcgggtccgcgttcggttctcc
ggccgtctcgtcgacggattcctgctcgaccgcatcgagaagagtgatcaccccggcaag
ctgggctggctcgaccgtgtcgtctccgccgaaccggtgctgtcaccggagctggcatcg
ctgtgccgcgccgtcgccgatcgctacgccggcaccatgggagatgttgtccggctggcc
attccgccgcgccatgcgcgaaccgagaaggagacgacacccgaaccgacgaccgtcgtc
gaggcgccggacctcgaggcgtggcgacgctatccgctggccgggtcgttcttcgaggcg
atcgccggggacggtcacccgcgagcggcgtggcaggccctgccgggcgaggactggccc
cgacgactcgccgaactggccgcggcgaccctggcggccggacgcggctgcatcatcgtc
gtgcccgaccagcgcgacctcgaccgggtgtgggcggaatgcgaaccactcatcggcgat
cagggagtcgcgctggcggccggactcggacccaccgcccggtaccggcgctggctcgcc
gcacgacgcggggcggcgaaactcgtgatcggcacgcgcagtgcggtgttcgcgcccgtc
accgacctcggtctggtcgtcgtctgggatgacggtgacgacagcatggccgatccccgt
gcgccgtacccgcacccgcgtgaggtcgcggtgctgcggtcgcatcaggaacgctgcgca
ctggtcctcggcggcttcgcccgaaccgcggaggctcaggcgctcgtcgcatcggggtgg
gcacacgacctcgtcgccgatcgtccgctcgttcgtcaccgcagcccgcgcgtgcaggcc
atctccgacgacgaccggcagatcgcccgcgatccgatggcgaggtccgcgcgaatcccc
gaggtcgccttcgacgctgcccgttcggcgttcgccgccgaccaaccggtggtgttcagc
gtgccgcgtcgcggctacgtgccgtcgctggcgtgtacccggtgtcgcgagcatgctcgg
tgtcgcggctgcaacggaccgctgcagatggacggaaaccagcgtctgagttgccggtgg
tgtggtcgcccggagccgaccttccgctgtcccgagtgtggcaacacgaaagtgcgggcc
acggtcaccggcgctcgacgcaccgccgaggaactggggcgcgccttcgccggtgtgccg
gtccacaccagcggtggcgactccatcatcgacgagatcgaaccgggcgcacggctcgtc
gtcgccacaccgggtgccgaaccggtcgcacccgacggctacggcgcagcgatcgtcgtc
gacacctgggcacaactcgaccgcgccgacctgcgcgcggaggaacacgccgtccgacgc
tggatggccctggccggcatggtccggccccacggcgagggcggccgcgtggtaatcgtc
gccgactcgactctcgcgccggttcaggcgctgatccgttgggaccccgtcggattcgcc
tccattcagttgagtgaacgcgtggaactgggtttcccgccggcggtcacgatggcctcg
gtcgacggtcccacgcaggtcatcaccgacttcgtcgaacacctcgagctgcccgagggc
tcggacgttctcggaccggtgccgcttccgccgggggtgcggccgcccgccggtagcgcc
gaatgggaggccgctgcggacgacgagatggaccgcatcctggtgcggttgccgcgcaag
cacggacgactcctcgcccaggctctcgccgccgggcaggcgcggcgcaacacacaccgg
cagaccgggccgatcagggttcaggtggacccgcctacgatcggatga
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