Gordonia sp. 135: GKZ92_12900
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Entry
GKZ92_12900 CDS
T06305
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
god
Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:
god00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
god03016
]
GKZ92_12900
Enzymes [BR:
god01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GKZ92_12900
Transfer RNA biogenesis [BR:
god03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GKZ92_12900
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Lipase_GDSL_2
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
QGP88453
UniProt:
A0A6I5ZFA1
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All DBs
Position
2865401..2866687
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AA seq
428 aa
AA seq
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MDTPPENRAAENNPPGDEAPEVEPLLAPAGGVPPVLSTAAEFADAARALAAGEGPIAVDT
ERASGYRYSQRAYLIQIKRRGSGSFLLDPIADPEALAPVIDALRGPEWVLHAADQDLPCL
RELGFECVELYDTELAGRLLGLAKVNLAAMVAQFLGLGLLKGHGAADWSRRPLPDDWLNY
AALDVEVLVELRDAMDAALAESGKDGWAREEFAYVLSRPPAPPRTDRWRKTSNIHTVKSA
RALAAVRELWTAREELAERRDVAPGRVLPDTAIVNAATVDPKSNSELTRLPVFGGPRQRR
QAGIWLSALQRARELPDSELPARKTTGPGLPPVSRWEQRNPEAAARMQKVRPALKEVAEH
HTLPVENILAPDVVRQLCWDGLAEPVTTEAMDAHLTAAGARPWQRQLSVDALTEALREAG
TTETTSSE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtggacacaccacccgagaaccgagcagccgagaacaaccccccaggggacgaagccccc
gaggtcgagccgttgctcgcccccgccggcggtgtcccgccggtgctctcgaccgcggcg
gagttcgccgacgccgcgcgagcactcgccgcgggcgagggacccatcgccgtcgacacc
gaacgcgcctccggttaccgctactcccagcgcgcctacctgatccagatcaaacgacgc
ggctcgggcagcttcctgctcgacccgatcgccgatcccgaggcactcgccccggtgatc
gacgcgctacgcgggcccgagtgggtgctgcacgccgccgatcaggatctcccctgccta
cgcgagctcggcttcgaatgcgtcgagctgtacgacaccgagctcgccgggcgcctgctc
ggcctcgccaaggtgaacctcgccgcgatggtcgcccagttcctcgggctcggcctgctc
aagggtcacggcgcggcggactggtcacgacgaccgctccccgacgactggctgaactac
gccgccctcgacgtcgaggtgctcgtcgaactccgggacgcgatggacgcggcactggcc
gagtccggcaaggacggctgggcccgcgaggagttcgcctacgtgctgtcccgcccgccg
gcccccccgcgcaccgaccgctggcgcaagacctccaacatccacaccgtgaagtcggct
cgtgcactcgcggcggtccgcgaattgtggacggcgcgcgaagaattggcggagcgccgg
gacgtcgctccgggtcgcgtcctgcccgacaccgcgatcgtcaacgctgcgaccgtcgac
ccgaaatcgaacagcgaactgacccgcctgccggtcttcggtggccctcgccagcgtcgc
caggccgggatctggctcagcgccctgcaacgggcccgcgaactccccgacagcgagttg
ccggcccgcaagaccaccggccccgggcttcccccggtgagccgctgggaacagcgcaac
ccggaggccgcggcgcggatgcagaaggtccgcccggcgctcaaagaggtcgccgagcac
cacaccctcccggtggagaacatcctcgccccggacgtcgtccgccagctgtgctgggac
ggactggccgagcccgtcaccaccgaggcgatggacgcacacctcaccgccgccggagct
cgtccgtggcagcggcagctcagcgtggacgcgttgaccgaggcgttgcgcgaggccggg
acgaccgagaccacatcgtcggagtag
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