Gordonia sp. 135: GKZ92_13360
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Entry
GKZ92_13360 CDS
T06305
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
god
Gordonia sp. 135
Brite
KEGG Orthology (KO) [BR:
god00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
god03016
]
GKZ92_13360 (truB)
Enzymes [BR:
god01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GKZ92_13360 (truB)
Transfer RNA biogenesis [BR:
god03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GKZ92_13360 (truB)
Prokaryotic type
GKZ92_13360 (truB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QGP88538
UniProt:
A0A6I5ZFG4
LinkDB
All DBs
Position
complement(2962744..2963664)
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AA seq
306 aa
AA seq
DB search
MADATIEKAGLLIVDKQAGITSHDVVSRCRKIFDTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYTATIRLGASTTTDDREGEILTTADASGVTDDEIASGVADLTGDIQQV
PAKVSAIKVDGRRAHALVRTGADFDLEARPVTVSRFDVLAIRRDGDTDNGTPGVVDLDVA
VDCSSGTYIRSLARDLGAALGVGGHLTALRRTAVGPFTLEHARTLDEVREDGRVSLDIDE
AVKLSFPRRDISDDEAESISQGRWLEPIGMKGVYVVVDPHEQAIALIQEKGKRASSVMVV
RPATLR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaaccatcgagaaggccggcctgctcatcgtcgacaagcaggccgggatc
accagccacgacgtcgtgtcgcggtgccgcaagatcttcgacacccgccgggtcggccac
gccggcaccctggacccgatggccaccggcgttctcgtcgtcgggatcgagagggcgaca
aagcttctcggcctgctatcgttgaccaccaagtcctacacggcgaccatccggctgggc
gcctcgaccaccaccgacgaccgcgagggggagatcctcaccaccgcggacgcctccggt
gtgaccgacgacgagatcgcctcgggcgtcgccgatctcaccggcgacatccagcaggtc
ccggcgaaggtgtcggcgatcaaggtcgacggccggcgagcgcacgccctggtccgcacc
ggcgccgacttcgacctcgaagcccgcccggtcaccgtgtcacgattcgacgtgctcgcc
atacggcgcgacggcgacaccgacaacggcaccccgggcgtggtggatctcgatgtcgcg
gtggactgttcgtcgggtacctacatccggtccctggcccgtgacctcggcgccgcactg
ggggtcgggggacacctcaccgcactccgacgcaccgcggtcgggcccttcacccttgaa
cacgcccgcacgctcgacgaggtccgcgaggacggccgcgtcagcctcgacatcgacgag
gccgtgaagctgtccttcccgcgccgcgacatcagcgacgacgaggccgaatccatcagc
cagggacggtggctcgagccgatcggcatgaagggcgtctacgtggtcgtcgacccgcac
gagcaggccatcgcgctgatccaggagaagggcaagcgggcgagttcggtgatggtggta
cgacccgcgaccctgcgttag
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