Gordonia sp. 135: GKZ92_14160
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Entry
GKZ92_14160 CDS
T06305
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
god
Gordonia sp. 135
Pathway
god03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
god00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GKZ92_14160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
god03019
]
GKZ92_14160
03009 Ribosome biogenesis [BR:
god03009
]
GKZ92_14160
Messenger RNA biogenesis [BR:
god03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GKZ92_14160
Ribosome biogenesis [BR:
god03009
]
Eukaryotic type
Pre-60S particles
RNases
GKZ92_14160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QGP88679
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All DBs
Position
3132561..3133160
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AA seq
199 aa
AA seq
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MQDKLVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDAALASMPDVVT
KMHADSGLTEEVRASTVTLAEAEKMVLDYIRKHVTSPGAVPLAGNSIATDRGFIARDMPE
LDAYLHYRMVDVSSIKELCRRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAFVP
APGPDVDALANIVKDLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaactggtgtggatcgattgcgagatgaccggcctccgactcgagtcggac
aagttgatcgagatcgcggccctggtcaccgacggtgacctcaacatcctgggtgacggc
gtcgacgtcgtcatccacgccgacgacgcggctctcgcgtcgatgcccgacgtcgtgacc
aagatgcatgccgattccggtctcaccgaagaggtacgcgcgtccaccgtcaccctcgcc
gaggccgagaagatggtgctcgactacatccgcaagcacgtgacgtcgcccggtgccgtc
ccgctggccggcaactcgatcgccaccgaccgcggcttcatcgcccgcgacatgcccgaa
ctcgacgcctacctgcactatcggatggtcgacgtcagttcgatcaaggaactgtgccgc
cgctggttcccgaaggtgtacttcggccagcccgacaagggcctcgcccatcgtgccctc
gccgacatccgtgaatcgatccgcgagctccgttattaccgtgcagccgccttcgtgccg
gctcccggccccgacgtcgatgcgctcgcgaacatcgtcaaggatctcgggcccgcctga
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